Detailed information of FUN_025732-T2 in Acropora pulchra

Genomic Location: ptg000020l:187411...200432
NR annotation: XP_015772256.1, PREDICTED: helicase POLQ-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2VPA6Helicase POLQ-like OS=Mus musculus OX=10090 GN=Helq PE=1 SV=2
Q8TDG4Helicase POLQ-like OS=Homo sapiens OX=9606 GN=HELQ PE=1 SV=2
Q9VSE2Helicase POLQ-like OS=Drosophila melanogaster OX=7227 GN=mus301 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002976 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270
all species →		DEADDEAD/DEAH box helicaseDomainInterproscan
PF21099
all species →		POLQ_helicalDNA_pol_Q helicase like region helical domainDomainInterproscan
PF00271
all species →		Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF20470
all species →		HTH_61Helix-turn-helix domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001
all species →		DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011545
all species →		DomainDEAD/DEAH box helicase domainInterproscan
IPR001650
all species →		DomainHelicase, C-terminal domain-likeInterproscan
IPR050474
all species →		FamilyHelicase Hel308/SKI2Interproscan
IPR048960
all species →		DomainPOLQ-like, helical domainInterproscan
IPR046931
all species →		DomainDNA polymerase theta-like, helix-turn-helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47961
all species →		DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_025732-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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