Detailed information of FUN_025874-T1 in Siderastrea siderea

Genomic Location: contig_25:518274...535995
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04494
all species →		TFIID_NTD2WD40 associated region in TFIID subunit, NTD2 domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006594
all species →		Conserved_siteLIS1 homology motifInterproscan
IPR007582
all species →		DomainTFIID subunit TAF5, NTD2 domainInterproscan
IPR037264
all species →		Homologous_superfamilyTFIID subunit TAF5, NTD2 domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19879
all species →		TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005669
all species →		Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006367
all species →		Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251
all species →		Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_025874-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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