Gene detail

Detailed information of FUN_025898-T1 in Dendrogyra cylindrus

Genomic Location: contig_57:2705242...2712580
NR annotation: XP_020603467.1, HHIP-like protein 2 [Orbicella faveolata]
Species Dendrogyra cylindrus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_025898-T1

ATGGTACTTACCTTACGCTTAGCTCGCCTACTGTTTTGCGCTGTACTTTGTAGTACAGTCCTGCTTCTTAACCAACAGTCAGTGGAAGGCCATCCTCAGTGCTTGGATTACAGAGCGCCTTTTCAAGTAGCATCAGGACTTTCCTTTTGCTCTCAAAAATACTCTGAGTATGGCTGCTGTACACCTAATCGTGATGAGGGGATTTCGAACGAGTACAACAAGCTATCGTCACGATTTTCATTGGGTAGTAGGCCGAAGTGCGCTAACTTTGTGAAAACGATTCTCTGCCTTGAATGCGATCGGTATGCAGCTCACATTTATGAAGCAGAAGGCAACGAGAATTTTGATTCAACCACAGCGGCGCCAGGATTGTGCTCTGATTTCTGCAAGAATTTTTACCAAGAATGCACTGACGTAGCATCGCATTTTGTGTCAACGGGTAAATGGAAGCTCAGATCTTCATCGAGTTCTCCCGGAGATCCCTTAACCGAGAAATCTCTTTGCGACGGATTGAAGCTAGAAGACGCTGACTACTGTTTTCCTCATGTGGAAACAGTCGATCAGAAAAATCTTTCCCGAAAATACAATTACGATTCAAATCAAAACTGTTTGTGCGTAGAGGAAATCGCACACGGACTGCGCAATCCTTTGGCTGCAGTCCACGCGGGAGATGGCTCAGGGAGATTGTTTATCGCCGAGCAGCCCGGCTTGATTCGCATCATTTCAGCTGAGGGAAAACTGTTACGGCAGCCATTTTTAGATCTCACTGACCGTGTCTTGACCTCGGGATCTTTCGGTGACGAACGAGGTTTCCTGAGCATTGCGTTTCATCCAGCGTTCAAGAACAATCGCAGATTCTTCGTGTATTACTCAACTCGTTTGCGCAGAAAATCAGGGCACAAAAAGAAACCCCCTTTCTTGGCATTTGATCACAGAACGGTATTGAGCGAATTCAGAGCTTCAGTTTACAATCGTAACAGAGGACTCAAACGATCAGAGGAAGTCATTCTTGAGGTTAATCAACCCGCAGATAATCATAATGGTGGAATGATATTATTCGGTTCGGACAGATTTCTATACTTGACGCTCGGAGATGGCGGAAGAGGCGGAGATCCCTTTGGAGAGATTGGGAATGGTTTGAACAGGTCAACTCTTCTTGGAAGTGTTATCCGAATCGACGTCAACGCACGGGGATATCGCTACAAAATTCCTTCGGATAACCCGTTCATAGGTACCCCAGGGATTCGATCAGAGACGTACGCTTACGGCACTCGTAATATGTGGCGATGTTCGGTGGACAGAGGGGATCGGAAGACGGGGGAGGGGAAAGGAAGGATATTCTGCGGCGATGTGGGTCAGAACAAATACGAAGAAATCGACATCATTGCCAAGGGAGGAAATTACGGGTGGAGAGGATACGAAGGATTCGAATGTTATGACAAGAAGCTATGTGGCTCAGCATTACTACgTAATGCCATTCCACCAATTTTCGCCTACAATCACTCAATCGGCAAATCGATTGTGGGTGGCTATGTGTATCGTGGCTGTCAAAACCCAAACTTATATGGCAAGTACATACTTGGAGACACCATAACATCCCGAATGTTCACACTGACCGAGAACAAGACGACAGGACGTTGGGAAGATAAAGAAATTTGCTTTGGTGATGACAAGTATTGCACCAATAAGCTGAGCGGAGAGTTTGAACGTTATATTCTGTCTTTTGGTGAAGATGAGGAAGGTGAGCTGTATATTCTCTCTACAAGCCTTCCCAGCAGCACAAAAACGGGCGGCAAAGTATATCGCATCGTTGATCCAGGAAGGAGAGGCGATCCAACAGAGTGTCCATCAAATCCAAATGCTTCTTCTGATTGCAAAGATTCTCGAGGGAGCAAGCATTTGTGTGAATATTACAAGTCCCGTAATAAGTGCTTTGTATATGAAGATTATTTCAAGAAGAAGTGTAAGAAAACGTGCGGTTTTTGCTAG

Transcript

FUN_025898-T1

GCAAAGTGAAGGGGGTCACGTTCAAGTAAGTATATTTTATTTACCACGCAAAATGGTACTTACCTTACGCTTAGCTCGCCTACTGTTTTGCGCTGTACTTTGTAGTACAGTCCTGCTTCTTAACCAACAGTCAGTGGAAGGCCATCCTCAGTGCTTGGATTACAGAGCGCCTTTTCAAGTAGCATCAGGACTTTCCTTTTGCTCTCAAAAATACTCTGAGTATGGCTGCTGTACACCTAATCGTGATGAGGGGATTTCGAACGAGTACAACAAGCTATCGTCACGATTTTCATTGGGTAGTAGGCCGAAGTGCGCTAACTTTGTGAAAACGATTCTCTGCCTTGAATGCGATCGGTATGCAGCTCACATTTATGAAGCAGAAGGCAACGAGAATTTTGATTCAACCACAGCGGCGCCAGGATTGTGCTCTGATTTCTGCAAGAATTTTTACCAAGAATGCACTGACGTAGCATCGCATTTTGTGTCAACGGGTAAATGGAAGCTCAGATCTTCATCGAGTTCTCCCGGAGATCCCTTAACCGAGAAATCTCTTTGCGACGGATTGAAGCTAGAAGACGCTGACTACTGTTTTCCTCATGTGGAAACAGTCGATCAGAAAAATCTTTCCCGAAAATACAATTACGATTCAAATCAAAACTGTTTGTGCGTAGAGGAAATCGCACACGGACTGCGCAATCCTTTGGCTGCAGTCCACGCGGGAGATGGCTCAGGGAGATTGTTTATCGCCGAGCAGCCCGGCTTGATTCGCATCATTTCAGCTGAGGGAAAACTGTTACGGCAGCCATTTTTAGATCTCACTGACCGTGTCTTGACCTCGGGATCTTTCGGTGACGAACGAGGTTTCCTGAGCATTGCGTTTCATCCAGCGTTCAAGAACAATCGCAGATTCTTCGTGTATTACTCAACTCGTTTGCGCAGAAAATCAGGGCACAAAAAGAAACCCCCTTTCTTGGCATTTGATCACAGAACGGTATTGAGCGAATTCAGAGCTTCAGTTTACAATCGTAACAGAGGACTCAAACGATCAGAGGAAGTCATTCTTGAGGTTAATCAACCCGCAGATAATCATAATGGTGGAATGATATTATTCGGTTCGGACAGATTTCTATACTTGACGCTCGGAGATGGCGGAAGAGGCGGAGATCCCTTTGGAGAGATTGGGAATGGTTTGAACAGGTCAACTCTTCTTGGAAGTGTTATCCGAATCGACGTCAACGCACGGGGATATCGCTACAAAATTCCTTCGGATAACCCGTTCATAGGTACCCCAGGGATTCGATCAGAGACGTACGCTTACGGCACTCGTAATATGTGGCGATGTTCGGTGGACAGAGGGGATCGGAAGACGGGGGAGGGGAAAGGAAGGATATTCTGCGGCGATGTGGGTCAGAACAAATACGAAGAAATCGACATCATTGCCAAGGGAGGAAATTACGGGTGGAGAGGATACGAAGGATTCGAATGTTATGACAAGAAGCTATGTGGCTCAGCATTACTACgTAATGCCATTCCACCAATTTTCGCCTACAATCACTCAATCGGCAAATCGATTGTGGGTGGCTATGTGTATCGTGGCTGTCAAAACCCAAACTTATATGGCAAGTACATACTTGGAGACACCATAACATCCCGAATGTTCACACTGACCGAGAACAAGACGACAGGACGTTGGGAAGATAAAGAAATTTGCTTTGGTGATGACAAGTATTGCACCAATAAGCTGAGCGGAGAGTTTGAACGTTATATTCTGTCTTTTGGTGAAGATGAGGAAGGTGAGCTGTATATTCTCTCTACAAGCCTTCCCAGCAGCACAAAAACGGGCGGCAAAGTATATCGCATCGTTGATCCAGGAAGGAGAGGCGATCCAACAGAGTGTCCATCAAATCCAAATGCTTCTTCTGATTGCAAAGATTCTCGAGGGAGCAAGCATTTGTGTGAATATTACAAGTCCCGTAATAAGTGCTTTGTATATGAAGATTATTTCAAGAAGAAGTGTAAGAAAACGTGCGGTTTTTGCTAGTTTCTATAAGCATAGAAAGTACAtgtaccgtaaatgatctattaaacgcccactctcaaatGAACGCTTCATATCTAATAtgcgcctccccccccccccccccccttgaggTACAAAGGTTGTATTAGACGCTCCCTTCTAATAAACGCCCCGTGTGTAATAGAAGCCCCCACCCCCGTAAGAATCGCCCGCCTCAGCCACCTAAGCGGCCAACGTTGGGGCCAGCATGGTTGGCCTCGATGACAATGAAGACATCGATATCAACCTATGAACGACATCTACGCAAATTGGATAAGCCCCCTactcacaaactctgttttcgGAAACTACGCGTcttatttgtttttgttgatgTTGTATAAATGCCTCATATCTAGTCCCCTCCTGGGACCCCTAAAATTTAAAAGACGCCCCGgacgtttattagatcatttacggctTACATTTTAAAGTTCTGCGTTCTGTAAACAGGGAATAAATTAATCCGATTCACAGAACATGTTCTACTACAAATGAAATATAAGACAGCAATGGAGAGGATGTTATTAAGatggtttccgctgaacattcgagcaataGACGTAAATATATAAAATTGCCAAACagaactcatagcatggtaacagtttgggagagaaaaatgaatttgaattaatctatatttttgttaaaacagACGTTTCACGTCAGTTCAAACCAAAATAACACGCGTTTTAACATTTTTACGAGGTTTGGCACTAACTTTCGCGataatgctttagaatttaattgCTGGGTCATTTAGAGTAATTAATTActgtgagatgtttcaaatagtattcaAAATGTAACCGTGCTTGGTAATtgatttttgcacttattgctccaACTTTCAGCGGATTCGAACCCGGCATAACTTGTATTTGTAATTCTACACATTTTTTAAGATCAAGCATGTAAAACGAAGTAAAGGACACATTTCAAATAAAGGTTATTAGGTCACGGGTCCATCGGGAAAATTTGTACGGGTATCCGACAAAAGAAATTTGTATGTGTACAGTTTTTGACaaataaaatggaaataaaatttaCTAACTGGC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9D2G9	HHIP-like protein 2 OS=Mus musculus OX=10090 GN=Hhipl2 PE=2 SV=2
Q6UWX4	HHIP-like protein 2 OS=Homo sapiens OX=9606 GN=HHIPL2 PE=1 SV=1
Q14DK5	HHIP-like protein 1 OS=Mus musculus OX=10090 GN=Hhipl1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004417 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03024 all species →	Folate_rec	Folate receptor family	Domain	Interproscan
PF01549 all species →	ShK	ShK domain-like	Domain	Interproscan
PF07995 all species →	GSDH	Glucose / Sorbosone dehydrogenase	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003582 all species →	Domain	ShKT domain	Interproscan
IPR018143 all species →	Domain	Folate receptor-like	Interproscan
IPR011041 all species →	Homologous_superfamily	Soluble quinoprotein glucose/sorbosone dehydrogenase	Interproscan
IPR011042 all species →	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR012938 all species →	Domain	Glucose/Sorbosone dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19328 all species →	HEDGEHOG-INTERACTING PROTEIN	Interproscan

Gene Ontology

No Gene Ontology signature was detected for FUN_025898-T1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25557	HHIPL; HHIP-like protein	-	Signaling proteins	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.