Detailed information of FUN_026014-T1 in Acropora pulchra

Genomic Location: ptg000020l:3444407...3450269
NR annotation: XP_029187807.1, NGFI-A-binding protein 1-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q62722NGFI-A-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Nab1 PE=2 SV=2
Q61122NGFI-A-binding protein 1 OS=Mus musculus OX=10090 GN=Nab1 PE=1 SV=2
Q13506NGFI-A-binding protein 1 OS=Homo sapiens OX=9606 GN=NAB1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009825 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04905
all species →		NCD2NAB conserved region 2 (NCD2)FamilyInterproscan
PF04904
all species →		NCD1NAB conserved region 1 (NCD1)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039040
all species →		FamilyNAB familyInterproscan
IPR006989
all species →		DomainNAB co-repressor, domainInterproscan
IPR038398
all species →		Homologous_superfamilyNAB co-repressor domain 2 superfamilyInterproscan
IPR006988
all species →		DomainNab, N-terminalInterproscan
IPR013761
all species →		Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12623
all species →		NGFI-A BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008134
all species →		Molecular Functiontranscription factor bindingInterproscan
GO:0045892
all species →		Biological Processnegative regulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_026014-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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