Detailed information of FUN_026016-T2 in Acropora pulchra

Genomic Location: ptg000020l:3458538...3494156
NR annotation: XP_029187764.2, LOW QUALITY PROTEIN: collagen alpha-2(I) chain-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21941Matrilin-1 OS=Homo sapiens OX=9606 GN=MATN1 PE=1 SV=1
P05099Matrilin-1 OS=Gallus gallus OX=9031 GN=MATN1 PE=1 SV=2
P51942Matrilin-1 OS=Mus musculus OX=10090 GN=Matn1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050149FamilyCollagen superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR008197DomainWAP-type 'four-disulfide core' domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24023COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0030414Molecular Functionpeptidase inhibitor activityInterproscan

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