Detailed information of FUN_026105-T1 in Acropora pulchra

Genomic Location: ptg000020l:4686698...4688933
NR annotation: XP_029200473.2, potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y3Q4Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 OS=Homo sapiens OX=9606 GN=HCN4 PE=1 SV=1
Q9JKA7Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 OS=Rattus norvegicus OX=10116 GN=Hcn4 PE=1 SV=1
O70507Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 OS=Mus musculus OX=10090 GN=Hcn4 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001631 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08412
all species →		Ion_trans_NIon transport protein N-terminalFamilyInterproscan
PF00520
all species →		Ion_transIon transport proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013621
all species →		DomainIon transport N-terminalInterproscan
IPR051413
all species →		FamilyPotassium/sodium hyperpolarization-activated cyclic nucleotide-gated channelInterproscan
IPR005821
all species →		DomainIon transport domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45689
all species →		I[[H]] CHANNEL, ISOFORM EInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003254
all species →		Biological Processregulation of membrane depolarizationInterproscan
GO:0005249
all species →		Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0035725
all species →		Biological Processsodium ion transmembrane transportInterproscan
GO:0071805
all species →		Biological Processpotassium ion transmembrane transportInterproscan
GO:0098855
all species →		Cellular ComponentHCN channel complexInterproscan
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_026105-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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