Gene detail

Detailed information of FUN_026176-T2 in Dendrogyra cylindrus

Genomic Location: contig_59:1351207...1372668
NR annotation: XP_020614902.1, plasma membrane calcium-transporting ATPase 3-like isoform X1 [Orbicella faveolata]
Species Dendrogyra cylindrus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_026176-T2

ATGGCATCCGAAGCGGAGATCAGGAAGGAAGAGCAGCAATCGTTGCATTCGCACGACTCCATGGATTTTAATGCAGTTGCTGATTTTTCAGATATTTCTGTCAAAGACCTTACGTTGCTTATGGAGCACAGAGGACAAGAAGCAAGAGATTACCTAAACTCAAAGTTTGGAGGACTGACCAAGCTAATCCATAAGCTGCACACTTCAAGCGAGAGGGGAATTGGAGGTTTTGCCGAGGACCTTGAGAATCGCAAGTTAGTGTTCGGTTGTAATTATATTCCTCCAAAACCTCCTAAAACCTTTCTGCAGTTTCTTCTAGATGCCTTCAAGGATACAATTCTTATAATTCTAGCGATTGCAGCAGTTGTATCGCTTCTGTTAGGAATTTTTGCCCCTGAAGAGTGCGAGGGTTCAGAAGATAACACCGGATGGATCGATGGATTTGCTATCATCGTTGCAGTGATGATAGTAGCATTAGTGACTGCAGTGAACGATTATCAAAAAGAGCAGCAATTTCGCGGCTTACAAAGTAAAATCGAAGGTGAACACAAGTTTACAGTAGTGAGACACGGAGAACCAATTGAAGTACTTAACAGTGAAATAGTGGTAGGTGACCTTTGCCAGGTCAAATATGGTGATTTATTGCCTGCTGATGGTGTTGTTGTCCAATGTAACGACCTTAAAGTTGATGAAAGCTCCCTGACTGGGGAATCAGATCTCGTTAagaaaggagagaaagacccgcTCTTGCTTGCTGGCACACATGTCATGGAAGGAAGCGGTAAGATGGTGGTTGCCGCAGTCGGGGTGAATTCCCAGACAGGAATAATCTTTGCATTGCTTGGAACACATGGCGAGAAGGAGGGAGACAAACCAGATGGCAAAGAGGAAGCTGCGCCCCAGTCGCCGTCAATAAAAGCTAGTCAGGATGAGTTTGAGGAGATCAACCTAGACGACGAGAAGGATTCTGATGCAAATGGCAAGGATAAGAAAGATAAGCAAGAGAAGTCTGTCCTTCAAGGAAAGCTTACCAAGCTGGCTGTTAGCATTGGTTGGTTTGGTGTTGCTGCTGCTCTTCTCACAATCATTGTCATGGTCTTACAGTTCAGCATTAGAAAATATGTAAATGAGAAAGCCTCCTGGAAGAATCAGCACTTAAATGCTTATGTGAATGCATTTATTACTGGTCTGACTGTGTTGGTTGTGGCTGTTCCTGAGGGTCTCCCACTAGCAGTTACAATTTCATTGGCCTACTCTGTAAAGAAAATGTTGGATGACAATAACTTAGTCAGACATCTTGATGCCTGTGAGACTATGGGAAATGCAACTGCCATCTGCTCTGACAAAACAGGAACTCTTACCACTAATCGCATGACTGTAGTTCAGAGTTACTTAGCTGATAATCATTACAAAAATGTGCCAAAACAAGGAGAGCTGCCACAGACACTGGTTGAGTTGCTGTGTAAAGGAATAGCAGTAAACAGTAGCTACGCTACCAATATACTGCCTCCAGAGTCACCTGATGGGCTCCCAACGCAAGTTGGAAACAAAACTGAGGCTGCATTACTGGGTTTTGTGCTTGAAATTGGTGAAACCTACCAAGATTACCGAGATAACAATCCAGAGTCAAGTTTTGTCAAGGTTTACACCTTCAATTCTGCAAGGAAATCCATGACCACTGCTGTGTGGCTTCCTGGTGGAGGATATCGTATATATTCCAAGGGTGCATCTGAAATAATTTTGAGCCGCTGTACATCAATTATTGGCAAAGATGGTGAAATCAGGCCATTTACAGCTGCTGATTCTGAAAAGATGGTGAGAGATGTGATTGAGCCCATGGCATCGGATGGCTTGAGAACCATTAGTCTTGCTTACAGGGATTTTCCTGCTAATGGAGTTCCCCCAGAGAAAGCAGGAGAAGCCAGTGCAGAGAGTGAGCCAGACTGGGAAAATGAAGGTGAAATCTTGTCTCACTTGACATGTATTGGAGTAGTTGGTATTGAAGATCCAGTCAGACCAGAGGTTCCAGATGCTATTCTAAAATGCCAGCGTGCAGGAATTGTGGTGCGCATGGTTACTGGTGATAATGTAAATACTGCAAGATCTATTGCTCTTAAATGTGGGATCCTGCAAGCAAACAGTGAGTTCCTTGTTTTAGAAGGCAAGGAGTTTAACAAGCGTATCCGTGACTCTTCTGGCaagGTGAGCCAGAAGAAGTTTGATGAAGTGTGGCCCAAGTTGCGTGTCCTGGCACGTTCTTCACCGCAGGACAAGTACACTCTTGTAAAGGGGATCATTGACAGCAAGCTTAATCCAACACGGGAAATTGTAGCAGTAACTGGTGATGGTACAAATGATGGTCCAGCACTAAAGAAAGCCGATGTTGGCTTTGCTATGGGTATTGCTGGAACAGATGTTGCTAAAGAAGCATCGGACATCATTCTTACTGATGACAACTTTAGGAGCATTGTCAAAGCTGTCATGTGGGGCCGCAATGTGTATGACAGTATCTCAAAGTTTTTGCAGTTTCAGCTTACAGTAAACTTGGTTGCTATTGTTGTTGCATTTGTTGGTGCTTGTGTTGTTCAGGTAAGTCCTCTAACTGGCACTCAACTCCTGTGGGTAAACCTCATCATGGACTCATTTGCATCACTGGCCCTGGCTACAGAACCACCAACAGAAGaactgttacaaaggaaaccttATGGCCGCACCAAACCACTCATCTCACGTACCATGATAAGAAACATCCTTGGTCATGCCATCTACCAGCTGATAGTCCTCTTCATCCTTGTCTTCATGGCAGATGACTTGTTTGACATTGAAGATGGTTACTTGGAAACAACACGCTGTAAGCCCACAATTCACTCAAGTTTGGTGTTCAATACATTTGTCATGATGCAGCTCTTCAATGAAATCAACTCGCGTAAAGTACATGGAGAGAGAAATGTGTTCTCTGGTATCACCCATAACCCTGTGTTTCTTATTATCATGGGTGGAACATTCGTTGTGCAGATACTAATTATTGAGTTAACTGGGAAGGCATTCCATGTAACAGGCCTTGGCTGGGAAGAATGGCTGTGGTGCGTCTTCCTAGGATTTTCAGAGCTGCTGTGGGGACAGCTTGTCCTTACCATCCCCAAAAACTCATTCCCTAAACTTTGTCGTTTTGGCACAAAAGAGCTTCCTCTTGCTACCATTGTAGAACCTGATGGACCAAAGGACAGCAAAGCTCGTTTACTTTGGATACGTGGCCTGACAAGATTGCAACATCAAATTCGTGTGGTGAATGCATTCAGAAGTGTTATTGATGGTCGTAGTCAGCGAGCCATTGCATCTCCAGCAGTGTTCAATTCATTGCTAGCCCCTGTACGTACTGCAATGGTTTATGATGATTCACAGTATCCTGCTGCTTTGGATAGCACTGATCCTGGAGCTGGGGCAATACCTCGGTGA

Transcript

FUN_026176-T2

ATCCTGTTTCTAAGGAAATAATAGTCATGCAAAAGTCACACGGGTCGTAGTTCTGAATAGAAGCAAGACTTTGGTCGTATTTTGGTGGGCGCGGCAAGTGCGGCTCACCGGCGAATGACGTCCTTGTAGCATAGCGACGATTCACCAATCAAATTTCGCGAGAATTCAAAATAGACCAATCACGGACTGTTCATCACGTGCCCTGGGCAAGTTTTTGCTTTGCTTGGCTTGTGAGAGCCTTCGTGAAAGGAGTGAACTAGATTGTTTCCTTGAATTACCTGTGTTTGTTCTTTGGTGTACAGAGTCAAAGGAGCGATCTGGTTCACTTTGACAAGCACAATCGATATCCTTTCAGGTTATCAACCTTGGAGAGCTTGCGCTGTTATTGCCTGCTCTACGACCTGCCGTGCTCGTGTTTCCCGTCCGCTGGGCTGGTGTCCTCCTCCATTCTGTTATTGTTAAAAGCTGCTTGCTTGTAATAAATTGTATCCCAGTCGATCTGGAAAGGTGTCAAAACTACAAGTTCTACTGTGGAATGATGTGATTGAATTGCTGTAAAACCAGTGGACTAGTAGACCTGCAGAGAGCAACATTCTGTTGTTTTGTCACAGCACAAGGAGTGACGCACTGTTCCCCGGAATCTGTCGCCTTCTGCCCATTTGTTTGGGAGAAAACTTTGTGAAAAGTTTCGTTTTCTAGCGAGTTTAATATCTGGCAGGTATTTCTTGGCTTTGCTGAGGCCCGTCGAAACCCGCTATTCCAGTCTGGGCAAAACATCTGGGACAAAAACTCTTTTCTTATTGACTGCTGTTATTGAAGAGCGAGGTGGAACGATCGAACTCACTATTGTGAGCCTTTTTTAATTGGAAGATACATCCCACGAGGCTTCGATTTCGAGAGCTGCATAATATTTTAAACATAAATAGAACTTATCTTTTTATAAACTAGTTTTCATCATGGCATCCGAAGCGGAGATCAGGAAGGAAGAGCAGCAATCGTTGCATTCGCACGACTCCATGGATTTTAATGCAGTTGCTGATTTTTCAGATATTTCTGTCAAAGACCTTACGTTGCTTATGGAGCACAGAGGACAAGAAGCAAGAGATTACCTAAACTCAAAGTTTGGAGGACTGACCAAGCTAATCCATAAGCTGCACACTTCAAGCGAGAGGGGAATTGGAGGTTTTGCCGAGGACCTTGAGAATCGCAAGTTAGTGTTCGGTTGTAATTATATTCCTCCAAAACCTCCTAAAACCTTTCTGCAGTTTCTTCTAGATGCCTTCAAGGATACAATTCTTATAATTCTAGCGATTGCAGCAGTTGTATCGCTTCTGTTAGGAATTTTTGCCCCTGAAGAGTGCGAGGGTTCAGAAGATAACACCGGATGGATCGATGGATTTGCTATCATCGTTGCAGTGATGATAGTAGCATTAGTGACTGCAGTGAACGATTATCAAAAAGAGCAGCAATTTCGCGGCTTACAAAGTAAAATCGAAGGTGAACACAAGTTTACAGTAGTGAGACACGGAGAACCAATTGAAGTACTTAACAGTGAAATAGTGGTAGGTGACCTTTGCCAGGTCAAATATGGTGATTTATTGCCTGCTGATGGTGTTGTTGTCCAATGTAACGACCTTAAAGTTGATGAAAGCTCCCTGACTGGGGAATCAGATCTCGTTAagaaaggagagaaagacccgcTCTTGCTTGCTGGCACACATGTCATGGAAGGAAGCGGTAAGATGGTGGTTGCCGCAGTCGGGGTGAATTCCCAGACAGGAATAATCTTTGCATTGCTTGGAACACATGGCGAGAAGGAGGGAGACAAACCAGATGGCAAAGAGGAAGCTGCGCCCCAGTCGCCGTCAATAAAAGCTAGTCAGGATGAGTTTGAGGAGATCAACCTAGACGACGAGAAGGATTCTGATGCAAATGGCAAGGATAAGAAAGATAAGCAAGAGAAGTCTGTCCTTCAAGGAAAGCTTACCAAGCTGGCTGTTAGCATTGGTTGGTTTGGTGTTGCTGCTGCTCTTCTCACAATCATTGTCATGGTCTTACAGTTCAGCATTAGAAAATATGTAAATGAGAAAGCCTCCTGGAAGAATCAGCACTTAAATGCTTATGTGAATGCATTTATTACTGGTCTGACTGTGTTGGTTGTGGCTGTTCCTGAGGGTCTCCCACTAGCAGTTACAATTTCATTGGCCTACTCTGTAAAGAAAATGTTGGATGACAATAACTTAGTCAGACATCTTGATGCCTGTGAGACTATGGGAAATGCAACTGCCATCTGCTCTGACAAAACAGGAACTCTTACCACTAATCGCATGACTGTAGTTCAGAGTTACTTAGCTGATAATCATTACAAAAATGTGCCAAAACAAGGAGAGCTGCCACAGACACTGGTTGAGTTGCTGTGTAAAGGAATAGCAGTAAACAGTAGCTACGCTACCAATATACTGCCTCCAGAGTCACCTGATGGGCTCCCAACGCAAGTTGGAAACAAAACTGAGGCTGCATTACTGGGTTTTGTGCTTGAAATTGGTGAAACCTACCAAGATTACCGAGATAACAATCCAGAGTCAAGTTTTGTCAAGGTTTACACCTTCAATTCTGCAAGGAAATCCATGACCACTGCTGTGTGGCTTCCTGGTGGAGGATATCGTATATATTCCAAGGGTGCATCTGAAATAATTTTGAGCCGCTGTACATCAATTATTGGCAAAGATGGTGAAATCAGGCCATTTACAGCTGCTGATTCTGAAAAGATGGTGAGAGATGTGATTGAGCCCATGGCATCGGATGGCTTGAGAACCATTAGTCTTGCTTACAGGGATTTTCCTGCTAATGGAGTTCCCCCAGAGAAAGCAGGAGAAGCCAGTGCAGAGAGTGAGCCAGACTGGGAAAATGAAGGTGAAATCTTGTCTCACTTGACATGTATTGGAGTAGTTGGTATTGAAGATCCAGTCAGACCAGAGGTTCCAGATGCTATTCTAAAATGCCAGCGTGCAGGAATTGTGGTGCGCATGGTTACTGGTGATAATGTAAATACTGCAAGATCTATTGCTCTTAAATGTGGGATCCTGCAAGCAAACAGTGAGTTCCTTGTTTTAGAAGGCAAGGAGTTTAACAAGCGTATCCGTGACTCTTCTGGCaagGTGAGCCAGAAGAAGTTTGATGAAGTGTGGCCCAAGTTGCGTGTCCTGGCACGTTCTTCACCGCAGGACAAGTACACTCTTGTAAAGGGGATCATTGACAGCAAGCTTAATCCAACACGGGAAATTGTAGCAGTAACTGGTGATGGTACAAATGATGGTCCAGCACTAAAGAAAGCCGATGTTGGCTTTGCTATGGGTATTGCTGGAACAGATGTTGCTAAAGAAGCATCGGACATCATTCTTACTGATGACAACTTTAGGAGCATTGTCAAAGCTGTCATGTGGGGCCGCAATGTGTATGACAGTATCTCAAAGTTTTTGCAGTTTCAGCTTACAGTAAACTTGGTTGCTATTGTTGTTGCATTTGTTGGTGCTTGTGTTGTTCAGGTAAGTCCTCTAACTGGCACTCAACTCCTGTGGGTAAACCTCATCATGGACTCATTTGCATCACTGGCCCTGGCTACAGAACCACCAACAGAAGaactgttacaaaggaaaccttATGGCCGCACCAAACCACTCATCTCACGTACCATGATAAGAAACATCCTTGGTCATGCCATCTACCAGCTGATAGTCCTCTTCATCCTTGTCTTCATGGCAGATGACTTGTTTGACATTGAAGATGGTTACTTGGAAACAACACGCTGTAAGCCCACAATTCACTCAAGTTTGGTGTTCAATACATTTGTCATGATGCAGCTCTTCAATGAAATCAACTCGCGTAAAGTACATGGAGAGAGAAATGTGTTCTCTGGTATCACCCATAACCCTGTGTTTCTTATTATCATGGGTGGAACATTCGTTGTGCAGATACTAATTATTGAGTTAACTGGGAAGGCATTCCATGTAACAGGCCTTGGCTGGGAAGAATGGCTGTGGTGCGTCTTCCTAGGATTTTCAGAGCTGCTGTGGGGACAGCTTGTCCTTACCATCCCCAAAAACTCATTCCCTAAACTTTGTCGTTTTGGCACAAAAGAGCTTCCTCTTGCTACCATTGTAGAACCTGATGGACCAAAGGACAGCAAAGCTCGTTTACTTTGGATACGTGGCCTGACAAGATTGCAACATCAAATTCGTGTGGTGAATGCATTCAGAAGTGTTATTGATGGTCGTAGTCAGCGAGCCATTGCATCTCCAGCAGTGTTCAATTCATTGCTAGCCCCTGTACGTACTGCAATGGTTTATGATGATTCACAGTATCCTGCTGCTTTGGATAGCACTGATCCTGGAGCTGGGGCAATACCTCGGTGATCATGATTGCTGTGGAAGTCCCTGCGGACAGTTAAAATTTTCCTCTCCTATTTTAACTCTTTTGATGTACAAAGTAGTTATGTGGGAAGAGACTAATCTAATTCACTGATGGTATACACCAGCAAGTGAACTTAAATGGATGTTTCAGTTTAACAGTATATTTGAAAGCAGTGATTTCTAAACTCAAGTCAGCAATGTATTTGGAAGAAAATTTTGTAGCTTGTGTGCTTATTTATTGCATGAAAAATTCTTTGGAATTTGCTAGACATGAACTATTGTATAATTAAAATTCACTTCTGTTGACGTGATTATGTAAACAAAGCATCTAAAATTAACCAAGGAACTGTTTTGCATTTCTTGTCTTTTTGGAGTCAGAGTCAGTTTTGGTATATTAATTTTCAATTGCTGGTGTACCTGGTGATTTTAAGACCTTGTATCAATTGCATGACAGATCTTCATAACAGTGTGATTAATTATTCAGACCAGCCAGTGTAGTTTGGATTGGGCGATCAGCAATTCCTGCTCCACCTTTATTACCATTATGTTTTGTAGGTATATAATGGACTATACCCAAAATTACTTGCCTTACCGTGTTCGGGTTTTCTCCATTTGTGGTATGCAGAACTATAACCTACATTAATCTTTACTACTTAATCTTGGAAAATGTTTTAACACTTGACAAAATAGTATCTGGTACTTTACATGTCCTTATAGTCGTGTGAAGTATGTTTTGTCATGTAGGTACCAAGGAATACAATTCTTCATTTatagttaaaaaaaatgtttccttaTAACTTAATTTTGATCTGCTCAAAACATGGTGCCTCATATTTTTTGGATATCCATTGTTTGCACAGGCCTTGAAAAGCTGTTGAAAATTTGCAAGGTCCTTGAAAATTGTTTTTTCTCCCTAACAGTCCTTAGATCTTTGCCAACTATCATTGGATTTTATTGAGAAGCTCTTGAATTCTTGAGAGAATGGTAAAATGGTAGGGGCAGTAGTGGACACAAGTCTCCAAAAGTTGATTTTGATGATACCAGATTAGGGTGCCGTAGTTGAACTACTAGGTGACTAATCCCAACTTCAATAGGAGGGTTTTGTTGTTTGTGTTCCCCCTGCCTAGGCAACTTTTATGTGATCAGCAAAAAGTGGAAAAGTCTGTGAATAGTCCTTGCAAAAATAGGTTTGAGGTCTATATAAACTATGATatccaaagaaaaaagaaatttgttttaGGGGAAATGCATATCTGAGAATTGTATTGAAGATTGCTACTTAAGTGTTTCTCTTTTGATTTATTAGGATTTGAAGAGATATTTTTTGGCTTTTAAGTCCCTGCTGTCATTATACTCCAGAGAGTCATCAGCTTTGAAAGCTGCTGGTTTGTTCTTACACTCGATGTTGTCAGGGATGTGAAGAGTAAGAACCAGCTTCCCTGACAAAACAGTACTCAATTCACCCCTTGAGAGAGATATCTGCACTGGTGATGTAACAATAGGCTTTTGGCTATCTCATTTGTTTAATTTGACTGGAGTGACTTTCACTCGAGTGTGGAAAATACTATCAAAATCACTAGAGTGGTGAAATGCGCTTGCAAAATTTCATCTGGTGTGGCATCAATTTAGATCACGTGAATTAAAAACTTTTATCACGTGGACACTATTATTTATCGGaaaagccaacaaagtgctttGTGATTTTTGGAAACTCTCTGCTGCAAACAGCATGGAGCCctttaaaataaaactaaaccTGCTTTTTTAAGGTAGAGTCATTGTTCATACAAATTCTGGAAAGACAATTGCAAACAAGCGACGGttaaacatcaatttttttcaGATCACGTGTTAAGAATCGAACTGCTTCTAGTTCAAATTTCTAACAGCAGTTTTACCACTGAGAAGTAAAAGCAAAACCAATCATGACTTGGTTGCCCAGGGTTCCCATGCTTTGTGCTTTCCTTAAACTTTTGATTGGtgtgtctgtgtcctttgtgatggCCAGAGTGATTGCGTTTTGGTTtatgacactcaattgaaaactgctctaacaACCAATCACAGACTACCTAGATCTGTCTGGGCGAATCAACTTTTGTCTGGGCAAAAACGATGTGCAGTTCCCAGTGACATGTTAATATGGAGTTTTAGCTCAAACCTCATCTCTAAAGTTTACTGGGTATGAGTGAAGAGAGCTGTTTTCTTGCAATGATAACTAAATATTTTCAGGTTAGAAATAGTGCTCTTCCTTGAAGCATAATCAGTGTTCTTATAGAAAATGACGGCTGAGATGTTGTTCTGTGAAATAAGATTATTTTTAGGCTATTTCAGTGGACATTTTGATTACATTACTAACACTGGTTTTTGCACCATGTTGCTCAATTTTTAATATGACAGCTTTTACTCTCTTCAATACAATCATacttttctattttatttttgaaaaagatcAATTGAATGGGCATTTCAAATATTGAGCTATTAAGGTGAACAAGTTCTCTATTTTTAGTAATTATTTATTTGCTGTATCATGATTCAAGGCTTTAGATTAAAGATTCCATGTAAGAATTTGCCATAAAAGATAGTATATTCTGAAATCAAGTGTTCAGTTATCAGCACTTGTTATCTGTATTAGGATCCTTTGCATTATAGATATGAAATATTTCACTGATATAGAGTTATTGTAGGGAGCTTCATTCAATAGGCTTAATAAAGGTGATTATTATCTTACAATTATGGCTGTATTTTTTCTACCGATTTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q16720	Plasma membrane calcium-transporting ATPase 3 OS=Homo sapiens OX=9606 GN=ATP2B3 PE=1 SV=3
D3K0R6	Plasma membrane calcium-transporting ATPase 4 OS=Bos taurus OX=9913 GN=ATP2B4 PE=1 SV=2
Q6Q477	Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001330 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00702 all species →	Hydrolase	haloacid dehalogenase-like hydrolase	Domain	Interproscan
PF13246 all species →	Cation_ATPase	Cation transport ATPase (P-type)	Family	Interproscan
PF12424 all species →	ATP_Ca_trans_C	Plasma membrane calcium transporter ATPase C terminal	Family	Interproscan
PF00689 all species →	Cation_ATPase_C	Cation transporting ATPase, C-terminus	Family	Interproscan
PF00690 all species →	Cation_ATPase_N	Cation transporter/ATPase, N-terminus	Domain	Interproscan
PF00122 all species →	E1-E2_ATPase	E1-E2 ATPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023298 all species →	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR023299 all species →	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR044492 all species →	Domain	P-type ATPase, haloacid dehalogenase domain	Interproscan
IPR001757 all species →	Family	P-type ATPase	Interproscan
IPR022141 all species →	Domain	Plasma membrane calcium transporting P-type ATPase, C-terminal	Interproscan
IPR006408 all species →	Family	P-type ATPase, subfamily IIB	Interproscan
IPR008250 all species →	Homologous_superfamily	P-type ATPase, A domain superfamily	Interproscan
IPR006068 all species →	Domain	Cation-transporting P-type ATPase, C-terminal	Interproscan
IPR018303 all species →	PTM	P-type ATPase, phosphorylation site	Interproscan
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR004014 all species →	Domain	Cation-transporting P-type ATPase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24093 all species →	CATION TRANSPORTING ATPASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0005215 all species →	Molecular Function	transporter activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005388 all species →	Molecular Function	P-type calcium transporter activity	Interproscan
GO:0070588 all species →	Biological Process	calcium ion transmembrane transport	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006874 all species →	Biological Process	intracellular calcium ion homeostasis	Interproscan
GO:0019829 all species →	Molecular Function	ATPase-coupled monoatomic cation transmembrane transporter activity	Interproscan
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0051480 all species →	Biological Process	regulation of cytosolic calcium ion concentration	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05850	ATP2B; P-type Ca2+ transporter type 2B	EC:7.2.2.10	Endocrine and other factor-regulated calcium reabsorption	ko04961	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Co-expression network

Genes whose expression across the transcriptome samples of Dendrogyra cylindrus tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.

No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.

Single-cell expression

Whether this gene can be visualised in the single-cell atlases of Dendrogyra cylindrus, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.

No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.

Epigenetic marks

Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.

No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.

What you can do with this gene

Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.

Analysis	What it does	Status
Primer design	Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed.	template found	open →
BLAST	Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start.	template found	open →
Expression heatmap	Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it.	no expression matrix	–
Gene family / orthogroup	Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue.		open →
Gene set analysis	Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it.		open →