Gene detail

Detailed information of FUN_026258-T1 in Acropora pulchra

Genomic Location: ptg000020l:6831343...6848025
NR annotation: XP_044166988.1, uncharacterized protein LOC114965083 isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_026258-T1

ATGGCAGAAGTGCAGATATCTCAGGAGCAAATATTGAACATTACTCTGCTAGCAAGTGAATGGAAGTCATCAGCTGGTGGTTTGTCAACATTAAACAGGGAACTTGCAATTCATCTGGCACAGATGAAAAATGTGGGAGTTTCACTCTTTGTGCCAGAGGGTGCTTGTAATGATGAAGACAAAAAGGAGGCTAGAACTTTTGGCATCAGTATTCTCGAGGCAGAGAAATGTAGAACTTTTGATCCTCTTTTCTGGTTGACCTACCCACCTCAAGATCACAAAATAGATGTTATTGTTGGTCATGATGTGAAACTAGGTGGTCAAATAGAACTCATCAGAAGACATCCAAATTTCAAAAATTGCAGGTGGGTTCATGTACTCCATACTGCTCCAGAAGACCTCAGTAAATGTAAGGGCTACAGTAGTCCGATTTCAAGAGGTGAAAATAAGCACTGGGAGGAAGTTAATCTTTGCAAGTGTGCTGACCTCGTTGTTCCAGTTGGACCAAGGCTTGGAGAGGCTTATCGTTCATATTTGCAGGGATGTAAAGAAGATGAGGACTTTTTTGAGCTTACTCCTGGTCTTTTTGACCGTGAATTTGGTGGGGTAAACCAGAGGGCAAAAAATGAGAAAGATATGTTTAAGGTGCTGTTGTGTGGGCGTGGTGATGAGGAGGATTTTGAATTGAAAGGGTATGACATTGCTGCTAAAGCATTTGCTGATCAGCGGCTGAAGGGAAAACGTTATTCTTTGCTTTTTGTGGGTTCACCTGACGGGAAGCAGGATGAGTTCAGGGAAAGGTTTCTCAAATACAGAATTTCAGATGAACAGCTGACAGTGAGAGAGTTTGTAAAGAGCAGAGAAAAAATGAAGGATCTTTTTTGTGAAGTGGATATGGTCATCATGCCATCAAAATCTGAAGGATTTGGCCTTGTTGCCCTTGAAGCCCTGTCAGCTGGTTTACCCATTCTTGTTGGGAGCCACTCAGGATTTGCAAGAGCAATGAAGAACATTCCCTTAGGGAAATGCAGCATAGTTAGAGATTCAGGAGATCCCAGTAGATGGGCTGAAGCAATTGAGGATGTACGTGATACACATGGAGTGTTCCTTGAAGGAAGCAAAATCCTGAAAGAGCATTATAGCAGGAAGTACTGTTGGAAAACACAATGCGAAGAACTTGTTGACAGATTATGGAAGATGGTTTATGTAGCAGCAGATGACTTAGTGGAACAATGCCCTGCTGCAGTCCCAGAATCAATTTCTCAGTTTGTTGTTGATCCAAAAACCATGCACATTGAGAAAGGTGTAGTTACCTCAGACAGAGGAAAGGGAGGAACATCAAGTGACGAATGTACCTTGCTTAAGCTTCAAGGGACATCTGCTGCTGAAGCTGAAGCAGCAGATGCCTTGGTCGCACAATGCCTTACTGGAGTCTCAGAATCAGTTTGTCAATCCAATCAAATAGCAATGCAACAGGACATTGAGGAAGGTGCAGTCACCTCAGGCAGAGGACAAGAGAGAAGACAGGGAGGTGACCTTACCTTGCATGAGCTTGCAGACCATCTCATCAAATTAAAAATCAAGACGTCAGGTCTAAATGAAGAACAACAGAAAGCTGTCTATGAATTGTTAATACACCAGGCAACAGAATACATGAAGTCACGAAACTATTCCAAAGTTAAATTACCAGGAGTGGGAGCCTTCCTTGAATATTTAGAATTGACATACAATGTGTCTTGCGTTACTTTCAATTTGGGCTCTCTTATCATCAGTCTGGATTGCAAAACGTTAAAAGGTCTTGATAAGCTGTGGAAGGACTATCTCTCTGGTCGCCTCAATAAAGTGGCAAAGAACCACCTTGTGACTTGTAAAATGATGATGTACCTCAACGTGAAGAAAATCAACCTGAAGACAACCATTGATAAGGAAAACTATTTGAACTGCAGGAAAGTTATTATGGGATTGTCAAGAGAAGGCGACGGAATTCCTTCACTTTCTCAACAAAGAATTCTTGATCAGGGAACTAGTATCATTGGGATGGCCACAGCTGCAGTTGACAAGGAGGTTAAGCAAGAGGACACAGACTGGATGATTAGGAAGAAAAACGCCGCAGCATTTAGAAGCGCCCTTCACAAGGCCTCAGTCAATGGACAATATGAGGAAGTCCAAAAGTACCTTTCCAGTAGATGTGCGGTTGACATAAAAGATCAGTTTTCGCTGACACCGTTGCATCTTGCTTGTTGGTATGGACAGGAATCTGTTGTCAAGCTCTTGTTAGAGCATGGTGCAGATGTTAATGCCACGGATAAGGTGAGCCTTAAGAATACTTCTTAG

Transcript

FUN_026258-T1

Protein

Uniprot

Uniprot term	Description
A1R8N8	D-inositol 3-phosphate glycosyltransferase OS=Paenarthrobacter aurescens (strain TC1) OX=290340 GN=mshA PE=3 SV=1
D5UJ42	D-inositol 3-phosphate glycosyltransferase OS=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / BCRC 11376 / JCM 18109 / NBRC 3775 / NCIMB 8073 / NRS 134) OX=446466 GN=mshA PE=3 SV=1
D1BD84	D-inositol 3-phosphate glycosyltransferase OS=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) OX=446469 GN=mshA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20706	GT4-conflict	Family 4 Glycosyltransferase in conflict systems	Family	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46401	GLYCOSYLTRANSFERASE WBBK-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0009103	Biological Process	lipopolysaccharide biosynthetic process	Interproscan
GO:0016757	Molecular Function	glycosyltransferase activity	Interproscan