Detailed information of FUN_026317-T1 in Siderastrea siderea

Genomic Location: contig_25:6928894...6973151
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00102
all species →
Y_phosphataseProtein-tyrosine phosphataseDomainInterproscan
PF13949
all species →
ALIX_LYPXL_bndALIX V-shaped domain binding to HIV DomainInterproscan
PF03097
all species →
BRO1BRO1-like domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045251
all species →
FamilyVacuolar protein-sorting protein Bro1-likeInterproscan
IPR000242
all species →
DomainTyrosine-specific protein phosphatase, PTPase domainInterproscan
IPR025304
all species →
DomainALIX V-shaped domainInterproscan
IPR029021
all species →
Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR003595
all species →
DomainProtein-tyrosine phosphatase, catalyticInterproscan
IPR038499
all species →
Homologous_superfamilyBRO1 domain superfamilyInterproscan
IPR004328
all species →
DomainBRO1 domainInterproscan
IPR000387
all species →
DomainTyrosine-specific protein phosphatases domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23030
all species →
PCD6 INTERACTING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005768
all species →
Cellular ComponentendosomeInterproscan
GO:0032456
all species →
Biological Processendocytic recyclingInterproscan
GO:0043328
all species →
Biological Processprotein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathwayInterproscan
GO:0045022
all species →
Biological Processearly endosome to late endosome transportInterproscan
GO:0071985
all species →
Biological Processmultivesicular body sorting pathwayInterproscan
GO:0004725
all species →
Molecular Functionprotein tyrosine phosphatase activityInterproscan
GO:0006470
all species →
Biological Processprotein dephosphorylationInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0016311
all species →
Biological ProcessdephosphorylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18040PTPN23; tyrosine-protein phosphatase non-receptor type 23EC:3.1.3.48
Cilium and associated proteinsko03037deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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