Genomic Location: ptg000020l:8090777...8104188
NR annotation: XP_044165984.1, PMS1 protein homolog 1-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families
| CDS |
| FUN_026367-T4 |
| Transcript |
| FUN_026367-T4 |
| Protein |
| FUN_026367-T4 |
| UniProt accession | Description |
|---|---|
| P54277 | PMS1 protein homolog 1 OS=Homo sapiens OX=9606 GN=PMS1 PE=1 SV=1 |
| Q941I6 | DNA mismatch repair protein PMS1 OS=Arabidopsis thaliana OX=3702 GN=PMS1 PE=1 SV=1 |
| F1NQJ3 | Mismatch repair endonuclease PMS2 OS=Gallus gallus OX=9031 GN=PMS2 PE=2 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004912 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13589 all species → | HATPase_c_3 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Domain | Interproscan |
| PF01119 all species → | DNA_mis_repair | DNA mismatch repair protein, C-terminal domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013507 all species → | Domain | DNA mismatch repair protein, S5 domain 2-like | Interproscan |
| IPR014762 all species → | Conserved_site | DNA mismatch repair, conserved site | Interproscan |
| IPR020568 all species → | Homologous_superfamily | Ribosomal protein uS5 domain 2-type superfamily | Interproscan |
| IPR002099 all species → | Family | DNA mismatch repair protein MutL/Mlh/PMS | Interproscan |
| IPR014721 all species → | Homologous_superfamily | Small ribosomal subunit protein uS5 domain 2-type fold, subgroup | Interproscan |
| IPR038973 all species → | Family | DNA mismatch repair protein MutL/Mlh/Pms-like | Interproscan |
| IPR036890 all species → | Homologous_superfamily | Histidine kinase/HSP90-like ATPase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10073 all species → | DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0006298 all species → | Biological Process | mismatch repair | Interproscan |
| GO:0030983 all species → | Molecular Function | mismatched DNA binding | Interproscan |
| GO:0016887 all species → | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0032300 all species → | Cellular Component | mismatch repair complex | Interproscan |
| GO:0032389 all species → | Cellular Component | MutLalpha complex | Interproscan |
| GO:0140664 all species → | Molecular Function | ATP-dependent DNA damage sensor activity | Interproscan |
FUN_026367-T4.
