Genomic Location: contig_62:302214...321117
NR annotation: XP_020617627.1, protein SDA1 homolog [Orbicella faveolata]
| CDS | |||||
| FUN_026891-T1 | |||||
| Transcript |
| FUN_026891-T1 |
| Protein |
| FUN_026891-T1 |
| Uniprot term | Description |
|---|---|
| A7S6A5 | Protein SDA1 homolog OS=Nematostella vectensis OX=45351 GN=sdad1 PE=3 SV=1 |
| A5D7C2 | Protein SDA1 homolog OS=Bos taurus OX=9913 GN=SDAD1 PE=2 SV=1 |
| Q5XIQ5 | Protein SDA1 homolog OS=Rattus norvegicus OX=10116 GN=Sdad1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08158 | SDA1_HEAT | SDA1, HEAT repeat | Repeat | Interproscan |
| PF05285 | SDA1_dom | SDA1, conserved domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR012977 | Domain | SDA1, N-terminal | Interproscan |
| IPR027312 | Family | Sda1 | Interproscan |
| IPR007949 | Domain | SDA1, middle domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12730 | HSDA/SDA1-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000055 | Biological Process | ribosomal large subunit export from nucleus | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0042273 | Biological Process | ribosomal large subunit biogenesis | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14856 | SDA1, SDAD1; protein SDA1 | - | Ribosome biogenesis | ko03009 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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