Genomic Location: contig_61:1596645...1601615
NR annotation: XP_020623910.1, fibropellin-3-like [Orbicella faveolata]
| CDS | ||||
| FUN_027009-T1 | ||||
| Transcript |
| FUN_027009-T1 |
| Protein |
| FUN_027009-T1 |
| Uniprot term | Description |
|---|---|
| Q64181 | Properdin OS=Cavia porcellus OX=10141 GN=CFP PE=2 SV=1 |
| Q63467 | Trefoil factor 1 OS=Rattus norvegicus OX=10116 GN=Tff1 PE=3 SV=1 |
| Q08423 | Trefoil factor 1 OS=Mus musculus OX=10090 GN=Tff1 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00008 | EGF | EGF-like domain | Domain | Interproscan |
| PF00088 | Trefoil | Trefoil (P-type) domain | Domain | Interproscan |
| PF00090 | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR000519 | Domain | P-type trefoil domain | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR000152 | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR051022 | Family | Notch Signaling and Cell Fate Determination | Interproscan |
| IPR018097 | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR044913 | Homologous_superfamily | P-type trefoil domain superfamily | Interproscan |
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR009030 | Homologous_superfamily | Growth factor receptor cysteine-rich domain superfamily | Interproscan |
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24049 | CRUMBS FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0007157 | Biological Process | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules | Interproscan |
| GO:0032991 | Cellular Component | protein-containing complex | Interproscan |
| GO:0045197 | Biological Process | establishment or maintenance of epithelial cell apical/basal polarity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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