Gene detail

Detailed information of FUN_027136-T1 in Siderastrea siderea

Genomic Location: contig_26:8027750...8062752
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_027136-T1

ATGAGAGAAGCTAAACTTGCTAATGAGGTTTATCAACAAGTTGCAAAATTGTTCCAGAATCAAGAAGATTTGCTTCAGGAATTCAGTCAGTTCCTTCCTGATGCTAATGGTGCTGCGACAATGCCTGGGGGTTTATTGTCATCAAGTAGACTACAGTCTCACTTATCGTCAGCAAGGAATGAATATGTACCTCCAGCTAAAAAGCCTGCAGTGGGTTTGAATTCGTCAAAACGCATGTCACACCAGATAAGAAGAAATTCCAACAGTGTGTCATCATCCCCTACACATCCTCAGGGCAAGAAAAAGTCAAGAAGTGCAATCAAAGATGTGACTTTAGCAGAGGCACAAAAAATTGGCACCTTCTCAGAATTCGCCTTCTTTGAAAAGGTGAGGAAAGCTCTCAAGAATGCTGAACTGTATAACAATTTTCTTCGCTGTCTTGTGTTGTTCAACCAAGAAGTAATATCCAGAGCAGAACTTGTACAACTGGCAGCTAACTTCTTAGGTAAATATCCTGAGCTGTTCCAGTGGTTCAAAGAATTTCTTGGGTACAAGGACTCGTCTCCCATGGAGAGTGTGTCTGCCTTCAAGGAGAGAACATCTGGAGAATTACACCATCTTGAGATTGACTATTCTTCATGCAAGAGATATGGCACAAGTTATAGAGCACTTCCCAAAAGTTACACGCAGCCCAAGTGTAGTGGAAGAACAGCACTGTGCAGAGAAGTTCTCAATGACACATGGGTGTCCTTTCCCTCCTGGTCAGAAGATACACCTTTCCCTGGAACAAGAAAAACTCAATATGAAGAGTACATATTTAGGTGTGAGGATGAAAGGTTTGAGCTGGACGTTGTGTTGGAATCTAATCTTTCTACCATTCGGGTTTTAGAAGCTATACAGAAAAAGCTACAAAGaATGCCGTCCGAAGAGCAGGCAAAATTCCGACTTGACAGCTGCATAGGAGGAACGTCAGAATCTATCCACAAAAAAGCAATCCAGAGGATATATGGAGATAAAGCTCCTGATATAATTGATGGTTTAAAGAAAACACCTGCAGTGGCTGTGCCGCTGGTATTAAAGAGGTTAAAGACCAAGGAAGAGGAGTGGAGAGACTCTCAAaggcagttcaacaaaatatgGCGAgatcaaaatgaaaaatattatcTCAAGTCCTTGGACCATCAAGGGATCACCTTTAAACAAAACGACTTGAAGGCCATGAGATCAAAAAGCCTGATTAATGAAATTGAGACTATTTATGATGAGAGACAAGAACAAGCTTCTGAAGGCAATGGAGATGCCACAGGACCTCACTTGCACTACAGCTATCAGGACAAGTCTATTCTGGATGACGCTGCTGGACTGATTGTTCATCACATGAAGAGACAGACAAGCATCCACAAGGAGGATAAAGCAAGGATTAAAGTGCTTCTACATTGCTTCTTACCAGACCTGTTTTTTGCTCCCAGGGGTGAATTGAGTGATGATGAAGACTCAGTAAAGGAACTCAATGGCCTTGGCAAACCTGAACTGACAAATGGGTTACCAGAGGCAGAAGCGGATGATGCATACAACTTAATATTTGTAAACAACAACTGGTATTTACTCTTCAGACTCCACCAGATGCTGTGTGAGCGACTGCTGAAGATGTACCAGCAGTCAGTAATGATAGCTGAAGGTGAAGCATCTGACAAGCAGCAGAGAAAGCAGGCCACAGCCATTGCACTGCGACTCAAGGCACCCAGTGAGATAGACCTGGAGGAGTACTACCCTGCATTTTTAGACATGATTAGAAACTTACTGGATGGTAATATGGATTCTACTAACTTTGAAGATACGTGTCGTGAGATGTTTGGTGTGCATGCTTACATTGCATTTACTATGGACAAGTTGGTTCAGAACATTGTCAGACAGCTGCACACCATTGTATCAGATGAGACATGTGGTCAGGTGACTGAGCTGTACCAACAGGAGCAGGGTAACCTGGCCACTGGAGGAAGCTCGGCCACTCAGCACACCCGTGCCTTGGCAGAAGCAGCTTATCAGAAGAGAGCCGAGTCCTTGCTGTCGGATGAAAATTGTTACAAAGTAGTGATCCACAAGGACAAGAACATCTGCCGACTGAGCCTGGAGCTGCTGGACACAGAGGACGCTCACTCTGAGGATCCTGTAGAAGTTGAGAAATGGAATGAATACGTGGAAAAGTTCGTGGGTAGTGAAGAGGTGTCCTCAGAAGTCAAGGATCATTTACAGAGCAAACCCATCTTCTTACCCAGAACGGTACGTTCTAACTCGCGAATGAAATCCGCCACCCCAAACAATGAGAAGGAGTCGACGACAAATGACAATGGCTCTTCAACTGATGAGGCTGAAAGCGAGGGTAATAACAGCGAGAAAGAGGAGGAAACTGATGAGGTTGAAGACATGGAAGTGGAAAACTCGATGGAATGCAAGCTGAGCTTGAACTCGTATAAAATTCGCTTTGTGAAAGGCAGTGAGGATTACTTGTACAGGAGGCAGGCTTTGAAGAGAGCGAAAGAGTGTCATCCTGTGGTCGCCAACCGTCTTCACATCAGATTCCGGTCGTGGCTAAGTAAGTGGGTGAACACTAATGTGACAAGCGAGCAGGAAAGCAGGTGTCGTGACTGGCTCCTGGGGAGGGTGGACGGGCTACATCCCTGTACCACCACCTGCGATGCTGTCACGAACGCCGTAATCAAACACAACAAATACTCTGTCAAGTGGGAAAAAGACAAGAACGACAAACAGCAAGAGGTTCCACAAAACGAGAGCAAGGAAGGCGAACAGAATGCCACTTCATAG

Transcript

FUN_027136-T1

ataccCTCCTTATCTCTATTAAGCCACCCACCTCATCCTCAGTTGGTGTATCTTTATATAAAGGGTAGGAAAAAACACATAAAGTTGGCCTGTCTGTATTGATAAGAAGTAAATTAACAGTGTTTGAGttttgtgcaaaaattattttaagattAAATGTTtaaaaccaccccccccccccctcccttgcTAATATGCCCCAATTCACAGGACCTGAAATTAAGTAAGCCCCAGGGGTAGGGTGGGTGATTTAGTAGAGCTTTGAGGGTATGTGTCTCACTGGCGTGGGCCTCGCAAAGTGAGTGACACCTTTCAAGTTATGGACTTTTTCACTTGAATGTTAAACTTAAACTGCACTTGTTAAATGGCTGAGACATTTTTGTTGGGATAGGAATTGACTTGTAAAGGGAATAGTTAATTACAAAACATTTTATCTTACTACCACTTGTAGGTGTTTGTCAATAGTCAACTGGTTAGTGGAGCTGGCGACATTGGTCAGATTCTCCACTATACAGAGGTGACCTCAATTCAAATGCCCAAGATATCCAGGGAGAAGGGGGTGGATAATTGCACTTGGAAGGGGTGTTTCATCAAGGTTTGAGAAGGAGAGCCAATGTTTGCCATAAGCAGGCAAACATTTTCTAATATTAAATCTGTGAGAACAACTCTGACAAGTTGCTCAAAGCAGACATGGGCAAAATTGATTTGCCTGCCTGCCCAGTCTTAATGAAACCTCTGAAGACTTCATTGAGTGATTCATTGGTTTCAAGAATTTTTTATGGCAAAATCTCTGGTAattaattttattctttttcatGTTTAGATCTACATGAGAGAAGCTAAACTTGCTAATGAGGTTTATCAACAAGTTGCAAAATTGTTCCAGAATCAAGAAGATTTGCTTCAGGAATTCAGTCAGTTCCTTCCTGATGCTAATGGTGCTGCGACAATGCCTGGGGGTTTATTGTCATCAAGTAGACTACAGTCTCACTTATCGTCAGCAAGGAATGAATATGTACCTCCAGCTAAAAAGCCTGCAGTGGGTTTGAATTCGTCAAAACGCATGTCACACCAGATAAGAAGAAATTCCAACAGTGTGTCATCATCCCCTACACATCCTCAGGGCAAGAAAAAGTCAAGAAGTGCAATCAAAGATGTGACTTTAGCAGAGGCACAAAAAATTGGCACCTTCTCAGAATTCGCCTTCTTTGAAAAGGTGAGGAAAGCTCTCAAGAATGCTGAACTGTATAACAATTTTCTTCGCTGTCTTGTGTTGTTCAACCAAGAAGTAATATCCAGAGCAGAACTTGTACAACTGGCAGCTAACTTCTTAGGTAAATATCCTGAGCTGTTCCAGTGGTTCAAAGAATTTCTTGGGTACAAGGACTCGTCTCCCATGGAGAGTGTGTCTGCCTTCAAGGAGAGAACATCTGGAGAATTACACCATCTTGAGATTGACTATTCTTCATGCAAGAGATATGGCACAAGTTATAGAGCACTTCCCAAAAGTTACACGCAGCCCAAGTGTAGTGGAAGAACAGCACTGTGCAGAGAAGTTCTCAATGACACATGGGTGTCCTTTCCCTCCTGGTCAGAAGATACACCTTTCCCTGGAACAAGAAAAACTCAATATGAAGAGTACATATTTAGGTGTGAGGATGAAAGGTTTGAGCTGGACGTTGTGTTGGAATCTAATCTTTCTACCATTCGGGTTTTAGAAGCTATACAGAAAAAGCTACAAAGaATGCCGTCCGAAGAGCAGGCAAAATTCCGACTTGACAGCTGCATAGGAGGAACGTCAGAATCTATCCACAAAAAAGCAATCCAGAGGATATATGGAGATAAAGCTCCTGATATAATTGATGGTTTAAAGAAAACACCTGCAGTGGCTGTGCCGCTGGTATTAAAGAGGTTAAAGACCAAGGAAGAGGAGTGGAGAGACTCTCAAaggcagttcaacaaaatatgGCGAgatcaaaatgaaaaatattatcTCAAGTCCTTGGACCATCAAGGGATCACCTTTAAACAAAACGACTTGAAGGCCATGAGATCAAAAAGCCTGATTAATGAAATTGAGACTATTTATGATGAGAGACAAGAACAAGCTTCTGAAGGCAATGGAGATGCCACAGGACCTCACTTGCACTACAGCTATCAGGACAAGTCTATTCTGGATGACGCTGCTGGACTGATTGTTCATCACATGAAGAGACAGACAAGCATCCACAAGGAGGATAAAGCAAGGATTAAAGTGCTTCTACATTGCTTCTTACCAGACCTGTTTTTTGCTCCCAGGGGTGAATTGAGTGATGATGAAGACTCAGTAAAGGAACTCAATGGCCTTGGCAAACCTGAACTGACAAATGGGTTACCAGAGGCAGAAGCGGATGATGCATACAACTTAATATTTGTAAACAACAACTGGTATTTACTCTTCAGACTCCACCAGATGCTGTGTGAGCGACTGCTGAAGATGTACCAGCAGTCAGTAATGATAGCTGAAGGTGAAGCATCTGACAAGCAGCAGAGAAAGCAGGCCACAGCCATTGCACTGCGACTCAAGGCACCCAGTGAGATAGACCTGGAGGAGTACTACCCTGCATTTTTAGACATGATTAGAAACTTACTGGATGGTAATATGGATTCTACTAACTTTGAAGATACGTGTCGTGAGATGTTTGGTGTGCATGCTTACATTGCATTTACTATGGACAAGTTGGTTCAGAACATTGTCAGACAGCTGCACACCATTGTATCAGATGAGACATGTGGTCAGGTGACTGAGCTGTACCAACAGGAGCAGGGTAACCTGGCCACTGGAGGAAGCTCGGCCACTCAGCACACCCGTGCCTTGGCAGAAGCAGCTTATCAGAAGAGAGCCGAGTCCTTGCTGTCGGATGAAAATTGTTACAAAGTAGTGATCCACAAGGACAAGAACATCTGCCGACTGAGCCTGGAGCTGCTGGACACAGAGGACGCTCACTCTGAGGATCCTGTAGAAGTTGAGAAATGGAATGAATACGTGGAAAAGTTCGTGGGTAGTGAAGAGGTGTCCTCAGAAGTCAAGGATCATTTACAGAGCAAACCCATCTTCTTACCCAGAACGGTACGTTCTAACTCGCGAATGAAATCCGCCACCCCAAACAATGAGAAGGAGTCGACGACAAATGACAATGGCTCTTCAACTGATGAGGCTGAAAGCGAGGGTAATAACAGCGAGAAAGAGGAGGAAACTGATGAGGTTGAAGACATGGAAGTGGAAAACTCGATGGAATGCAAGCTGAGCTTGAACTCGTATAAAATTCGCTTTGTGAAAGGCAGTGAGGATTACTTGTACAGGAGGCAGGCTTTGAAGAGAGCGAAAGAGTGTCATCCTGTGGTCGCCAACCGTCTTCACATCAGATTCCGGTCGTGGCTAAGTAAGTGGGTGAACACTAATGTGACAAGCGAGCAGGAAAGCAGGTGTCGTGACTGGCTCCTGGGGAGGGTGGACGGGCTACATCCCTGTACCACCACCTGCGATGCTGTCACGAACGCCGTAATCAAACACAACAAATACTCTGTCAAGTGGGAAAAAGACAAGAACGACAAACAGCAAGAGGTTCCACAAAACGAGAGCAAGGAAGGCGAACAGAATGCCACTTCATAGAACTCCCGCTGTACAGTTCTTATCATTACAAAGTGTTACATAGGTAAATTAGTGTAGAACGGTCAAAGGGTGACATGACAGATGGGAACGTGACAAAAGCATAGCGTGACGTGCGTAACCCCTCAAATCTAGTACGTCTGACATGTGAGTATTTcactcaaaaaaaaaaggtaatatAACAGGATGTACTTATTGTTCAAGCGAGCTCTGTCCTCTGTAACAGTTTTATTGTTTAATCTTGTCTGCGTTTCTCGATTATTTCGAGAACCTTAGAAAATATTTGTCACAATTTAGGGTACTGTCACTCCAATGTCTTGCTGTCCCTTTCGACTGTTATTTTGTAAATACGACATACACGTAGAATAACCGTTTGATACAACTGTCGAAAGTCACGAGTGAAATTTATTTTGGGTCTGCTCAAGGTAGATTTTCTTCTTGCTAATTCAGGATCAGATAAAGCAATCAAGAATTCAGCCGTGAATTTCATGGGATTTGAAGGTCGTTGAGTTCTCTCTCCAGCGCGCTACGAAAAACTTACCGAAAGACGTAGTAATTTGTGTCGGTTTCTTTCATCTGCTCTCAACTTCTATTCAGCCGTTATTTGGGTTGGGTTGGTTTCTTATGAAACTTGAGCTCTATCGTCGGGCAAGTATTATAAACTTTAGAATCGGTTGATACCCTGCTACTTAATGTACGATCGCTGTGACAGCTCGTCTGCCTACTGACTTTTATTAGATACAAAGGATAGAGTCAATTCTATTCATAAATCACAAAGCCAACAAAATCCTTAGGAGGATTTTAACATTTAGAAGGCCTGTTTTAAGTTGAACGAGACTCGGTAAAGCGTATACTGATTTTCCAGGCAAAGCTTTCCCTTCAGTTTTTTCTGGGAGGAGAGAGCCTGTTTCTTGGGCACGTCTACCAAAGGTGTAAGGTCATTAGATGAGCATCTTTATTCTAGTGCAAGCGATTTCAAGGGTCGTGCCTGTGTTAGTTTACTCTCAACGTAACAGACAGCCATCCATCCTTTagaaaaatctaaaaaaaaaaacaagtttcaGACAGCAGACTGGAAAATAATTTATCTTTTTAGTGCATGGAGCTTGTAACTTTCGTGTTACCGAGGGATCGTTAAGTCAAGGTGCCGTCATATGGTAAACTTGAGCTGACACACTCCAACCttgtccccagggccttctccttaTTCAAAATGacggatcggagaaacccctggccaaggcagCCAAAATGGCGCCAAAAATTCGTGAGGATTTTGTCCCGTAAACAcaatgaaatgtcttcgtttctgTTAAACAATGGATttagattgcaagaaaacaaacgggcgccagacgctggaaacaacctccgaaaaagtcatttcatcatgtgtcacgtgacaaaatactcagAGATTCCtagagtatttcagcagccttggccagggtttctccgatcgccactttgaacgaggagaaggccctggggacgaggttggacaAACTCCAGTGTCGTCGCAAATGCCCAGTTCCCCGAGTGTTACACGGCCGTGGGGAATCATGGGAGTTGTATGCCAAATGACAGGCCCTTTTCTGTTCTTCAAGTGAACTAAATGAAGTATTTCAGGTGAGAAGACGTCGACAAGTAGGACTATTTGATCAGTAAAACAACCTTTTAAATAAGACGCAGGCGTAAACTCGTCTTGTTGCATAGAACCACCATGATTACCTGCAGGCATGTTCCACAGGGGGATCTGGGCATTCCACTAACCTCCACAAACTCACATTTGTTGCCTAATTCCTTGGTTGATCCTCATTCTGGCGTCCTAAGTGTAAACGGCACGCCTAGTTGAAAAGTTAACGAAAGGGAGTGGATGTAATCTCGCGCCAATTATTTGCCAACATGTTTCTCAACTTTTGCGGCGACGTCCACAAGAGTCAACGCTATAGCAAGGTTGCAAACTTTACTTTGTCGCGCAAAGGTGCCTTTATGTAGTGTAAATCTTAGATCACCCAAAAGAAAAATGccccccttccccaccccccgCTTGTTTTATAAGGTGCCAAATTTTTAATCGTAATATTCTTCTCTTGGCCACGTTCTGTCGTGTCGGTTAGCGTGAGTGAAAGTTAGTCAACATAAACATTTCTGGGAGAAATAAGCTCTGTTTGCACCCCATTTAGGCTGGTTAATTAGTGTACAGTACAGAAAATTATCGGGTTGTAGCTTTTGCTTTAAGCAGAATAATGAACTGTGATTTTGTGAAGTTGGTTTCTATCCAACAAGTAGTCAGTTGTTACTACATAAATTATACGCACAATGAACTGCAGTTTGTAACGCTGTTGTTAGACTTGTATGTGATGTGAATCCAGTGTCGTGGTCAGATAATTTATTCTTTGACCCTGACCCACTTTTACAGATATTTATCATATCGAATAAAAtctcaaaattaaaactgtcttgttttttttgttgttgttttttcttttttttttttcttttttgaattggTAAGTATAGTCTTCCTATCCTGGGTAAGAGACCTCGTGTCACTCAAAATAAGTCATTTCATCCTCTTTCAAGACACTTTGACTGTTGCTTACAAACTTTTTTAATCTTCCTACTGGTGTCTATCGGGCAAATTTCTCTTGCATCTTTCTCCTCACTCTCATTACAGTGTGCAGACCTGGCCTTCCCAAACTTTTTCACGGCTATGATCCGGTCGTTATGATTCACCCGTAATCACAAAGCACTGAAGGAAATATCCTGATTTTTTCCCAGAGGAAGTAAGCAAACATGCAAAATTAACACTTAGAATAAATTTCTATTAAAATGAACATATGAACAAATTAACCAGGGAGTAAGTGCGAAGAGTCTCCCCTAGCGTTTCTAAATTTTAAAGTAAAGTACACGGACAGATGTTGGCCGCTCAAAACCGATTTGGTTTTGCGGCCGTTTATTGTCGTTTTTAGTGTAgttgggaggggtggggggtgtTTTTCAGCTGCCGGGGTTAACATCAGTGAAACCATTACAGTACTGAGGTTCTAGTTTTGCGATAAGTGCTCAAACTGAGAAAATTTTCAAGATTTGATATGCCTTAGTTTTACGAGAGATGCACCTATTACAAATCATCCGTTCTTTGAGGAATGTACTTCAATTTTCAACGGAATTCTTTTCCTATAGAAGCGGATAATTTGAATCCTTAGTTTTAAAAAGTATCAGCTGAGCCAAAATCTGGAAGTTTAATTTAACATACGTGTTTGTTTACCCAGAAGGTGAACTGACAATTTTCAGGATAGAACTACTTTTGATCCGAAGGGTAGCAGGAAACCAGTCCGCTGATGATTTGCTGATCATGATGCCATCCTACACTGAAGACTCGAATGAACGTTACAGCATCTGCAAGAttaaaatgaaaggaaaaattACTGTGTGCCTCTCTTATAAAACAAGATTTCTTGAATCTGCTACCTtg

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16879 all species →	Sin3a_C	C-terminal domain of Sin3a protein	Family	Interproscan
PF08295 all species →	Sin3_corepress	Sin3 family co-repressor	Domain	Interproscan
PF02671 all species →	PAH	Paired amphipathic helix repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036600 all species →	Homologous_superfamily	Paired amphipathic helix superfamily	Interproscan
IPR003822 all species →	Repeat	Paired amphipathic helix	Interproscan
IPR039774 all species →	Family	Transcriptional regulatory protein Sin3-like	Interproscan
IPR013194 all species →	Domain	Histone deacetylase interacting domain	Interproscan
IPR031693 all species →	Domain	Sin3, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12346 all species →	SIN3B-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000118 all species →	Cellular Component	histone deacetylase complex	Interproscan
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0000785 all species →	Cellular Component	chromatin	Interproscan
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0016580 all species →	Cellular Component	obsolete Sin3 complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11644	SIN3A; paired amphipathic helix protein Sin3a	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of FUN_027136-T1 across 85 RNA-seq samples of Siderastrea siderea. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

85Samples

78TPM > 0

7Conditions

540.0Max TPM

205.5Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
holobiont · low.pH_high.temp	20	19	248.10	480.02
holobiont · low.pH Control.temp	20	18	173.73	359.69
holobiont · control.pH_high.temp	20	19	248.38	540.00
holobiont · control.pH Control.temp	19	16	197.42	380.32
Whole organism	4	4	58.91	65.56
unannotated	1	1	32.28	32.28
live coral tissue/skeleton	1	1	41.79	41.79

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR22214409	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	480.02
SRR22214403	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	412.44
SRR22214406	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	386.82
SRR22214413	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	326.11
SRR22214421	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	325.60
SRR22214419	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	306.56
SRR22214414	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	278.49
SRR22214412	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	269.02
SRR22214410	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	260.80
SRR22214420	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	259.87
SRR22214418	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	255.93
SRR22214408	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	247.89
SRR22214415	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	223.02
SRR22214407	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	206.61
SRR22214417	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	206.56
SRR22214423	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	185.80
SRR22214402	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	178.14
SRR22214404	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	139.50
SRR22214405	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	12.87
SRR22214416	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214436	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	359.69
SRR22214429	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	352.39
SRR22214438	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	280.13
SRR22214437	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	259.42
SRR22214425	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	246.05
SRR22214430	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	192.60
SRR22214445	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	186.39
SRR22214442	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	177.58
SRR22214443	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	177.02
SRR22214441	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	173.30
SRR22214439	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	165.49
SRR22214434	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	158.76
SRR22214440	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	150.76
SRR22214428	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	146.04
SRR22214424	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	140.55
SRR22214431	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	129.31
SRR22214435	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	106.43
SRR22214426	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	72.67
SRR22214427	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214432	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214451	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	540.00
SRR22214453	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	527.40
SRR22214464	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	355.10
SRR22214458	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	347.43
SRR22214456	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	312.38
SRR22214462	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	309.63
SRR22214467	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	279.41
SRR22214459	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	275.67
SRR22214460	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	252.86
SRR22214447	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	223.46
SRR22214452	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	222.45
SRR22214454	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	199.34
SRR22214457	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	190.62
SRR22214461	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	185.37
SRR22214465	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	184.18
SRR22214446	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	155.49
SRR22214463	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	153.63
SRR22214450	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	149.62
SRR22214448	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	103.57
SRR22214449	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214466	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	380.32
SRR22214547	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	368.73
SRR22214444	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	340.38
SRR22214506	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	336.52
SRR22214400	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	300.41
SRR22214481	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	295.89
SRR22214471	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	253.40
SRR22214548	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	237.89
SRR22214468	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	232.37
SRR22214411	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	224.27
SRR22214422	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	216.49
SRR22214535	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	201.05
SRR22214469	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	161.16
SRR22214524	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	140.94
SRR22214455	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	31.47
SRR22214546	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	29.76
SRR22214433	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214470	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214492	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR14295601	Whole organism	Whole organism	not recorded	not recorded	SRP315757	65.56
SRR14295604	Whole organism	Whole organism	not recorded	not recorded	SRP315757	59.82
SRR14295600	Whole organism	Whole organism	not recorded	not recorded	SRP315757	57.55
SRR14295603	Whole organism	Whole organism	not recorded	not recorded	SRP315757	52.70
ERR12861049	unannotated	not recorded	not recorded	not recorded	ERP159209	32.28
SRR12454619	live coral tissue/skeleton	live coral tissue/skeleton	not recorded	not recorded	SRP277390	41.79

Source: CnidoSite RNA-seq expression matrices (SSIDE_TPM, StringTie quantification over 85 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.