Gene detail

Detailed information of FUN_027232-T1 in Colpophyllia natans

Genomic Location: contig_62:1887079...1901331
NR annotation: KAJ7384788.1, E3 ubiquitin-protein ligase pellino 1 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_027232-T1

GGAGTCCCTTGTGTGTCGGGTATTCTTGTAGACCATGTCATCTCTCTGATGAAGAGTTAAAATTGGCGGTGGATCTATGACAGAAACTGCCGAAGAGTTTCTTGATGGGGAGGGGAAAAATGGGCAACCAAAAGTTAAACGACTCAAAGCAATAAAAGATGTAGGTATGACATCCAGTGATAACGATGAAAAAGACAGTATTTACGGTGCACTTGTGGTTCTTGGTTACAATGGTTCTCTGCCCGACGGAGGAGAACTCAAGCGCCGTCACCGAAGCTCATATATTTTGAGAAAGAAGGGATCCCCCTCAGGAGTGCAACCCTACAAATTGCACCTGGCTTCTTCAAACACTGGAATGCAGATTGTTAATTCAGAAGCCCACAGTGTATCATACACATTATCCCGTGGTAATGCAGTTGTAGTTGAATATAGTAGAGACCCTACAACTGATATGTTTCAGATTGGCCGTTCAGCTGATTCTAAAATAGACTTCATTGTGATGGACACAGTTCCTGGGAACAAACGAGACGAAGTCAATCAAGAGACACAAAAAAGCACCATTTCCAGATACTCATGTCGGATTGTTGTTGATAGAAGTCCTCCTCACACAGCCAGAGTGTTTGCTGCTGGTTTTGACAAATCTAGTAATATATTTTTAGGGGAAAAAGCACCAAAGTGGCAAAATGAGGAAAACATGATGGATGGTTTAACAACAAATGGAGTTCTTTTAATGAATCCTAAGGGTGGCCCATCTTGTCAGCCAACAATATGGCGGGAAATTTCAGTTTGCGGTAACGTATATGGACTTCGCAAAACAAGGTCAACTACTGAAAGAGGAAAGACTGTTGAGGATGAGTCAAATGTTCTTCTTGATGGGTCGTTAATTGATCTTTGTGGAGCAGTTTTACTCTGGCGATCTGCTGAAGTACTAAAGGAAATGGCAaCTTTGGAAACCATTGACAAAATGAGGGAGGGTCTTAATGCGTCTAGACCACAATGTCCTGTTGGTCTCACAACATTGAGATTTCCTAGTCAGTTAGAGCAGCCTGGCAGCAGTGTGGCAAGTGCTCAGCCATACGTTTACCTCAAGTGCGGCCACGTGCATGGTCTTCACACATGGAATTCGCCTGAGAGAAATGCTGCTGATAAACGAACATGTCCAGTCTGTTTACAGGCCAGCAGTTATGTTCCATTGAGCCTTGGAAGAGAGCCAGCATTCTACCAAGGAGAACCTGCAGCAACTCATGCTTTTGTACCATGTGGACATGTTTGTTCTGAAGAAACAGTCAGGTTCTGGCAGCAGGTACCCATTCCCCACGGATGTGATGCTTTCCAGGCCATTTGTCCATTCTGTGCCCAGCCCCTGGAAGGTGAAGATGGCTTTGTCAAACTCATATTCTCAACCGATGAATAACTTACCTAATAATACACTTGAAAAAAGTTATTCCATTCTGATTAGCTATGAGCAGTGCAGTTGAAATATAACTCTTTTCTCTGGGTCTTCCAAAGATAGCTGAAGATAACAGCATGTTTTGAACTCTCCCAAAGATTGCCAAAGATTCTCCAATATTTTcagaagctttttttttttaatttccaaagATGGGCGCTGCACACTGCCTTAGTGATCAATTCCTGTACATCCAGAGGCTGCATAGCCTGTTTTTCAAGTGTGTTGTTAACAAGTGTGATTTTTCtcatgcaatttggaataattttttttagaaactacAAATATTAACTAAATTAATTGGATTAAATTGCTGGTggttatttattccaaattgtaCTCAAAATCATCTGATTATCTatacaaataaaacaaatagtGTACAGCGGTCTTGCAATTTTTCACATAAGTTAAtaagtttgaagagaaattTATTTGTGAAATAGTTTATGGGTAAATATTGTGTCACATGTTTTGTGTTCAGATACTGCCAAGCCAATAATAATGCTGGTCATATTATGATTGGGACTAAAATTGTACAGTAGTTGTGTCTAGCTTCAAGACATTTCTTCTTCACCAACATAAAGAGTAGTTCTATTCAGTAATAATGTGAAACTTAACCTGTAAGCAGGCTCACCTTGTGAGTCACACATGTGCGTGGGAAAGAGCAAAATGATCCAGGAGGAAGGAGAGGCACCAGGAAAGTGAGGCTTCCTTGATCtctgtaattttttcatttctactTTGCCCGAGCAAAGTGATCAAATACCATTGGTCGAAAAGCAggaaaagtaagaaaactgTCAATCTATTATGTTTGATGAGGAGTGATAAGATCTTCATCGAGTTGGTAATTTACTGCACATTCTCACAATAAAAAATAAGCGTCCATATTTGGAGTCAGAGGGAGAGTTGAGTGTGCATATCACTAATG

Protein

Uniprot

Uniprot term	Description
Q8C669	E3 ubiquitin-protein ligase pellino homolog 1 OS=Mus musculus OX=10090 GN=Peli1 PE=1 SV=2
Q96FA3	E3 ubiquitin-protein ligase pellino homolog 1 OS=Homo sapiens OX=9606 GN=PELI1 PE=1 SV=2
Q9HAT8	E3 ubiquitin-protein ligase pellino homolog 2 OS=Homo sapiens OX=9606 GN=PELI2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20723	Pellino_RING	Pellino, RING domain	Domain	Interproscan
PF04710	Pellino_FHA	Pellino, FHA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006800	Family	Pellino family	Interproscan
IPR048335	Domain	Pellino, RING domain	Interproscan
IPR048334	Domain	Pellino, FHA domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12098	E3 UBIQUITIN-PROTEIN LIGASE PELLINO-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0008592	Biological Process	regulation of Toll signaling pathway	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11964	PELI; pellino	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala