Detailed information of FUN_027701-T1 in Colpophyllia natans

Genomic Location: contig_65:748909...755753
NR annotation: KAJ7390469.1, ribosomal RNA assembly protein krr1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B4G9L6KRR1 small subunit processome component homolog OS=Drosophila persimilis OX=7234 GN=dbe PE=3 SV=1
B4N0P7KRR1 small subunit processome component homolog OS=Drosophila willistoni OX=7260 GN=dbe PE=3 SV=1
B4KF66KRR1 small subunit processome component homolog OS=Drosophila mojavensis OX=7230 GN=dbe PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17903KH_8Krr1 KH1 domainDomainInterproscan
PF21800KRR1-like_KH2KRR1 small subunit processome component, second KH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041174DomainKRR1 small subunit processome component, first KH domainInterproscan
IPR024166FamilyRibosomal RNA assembly KRR1Interproscan
IPR048549DomainKRR1 small subunit processome component, second KH domain, eukaryotesInterproscan
IPR048550DomainKRR1 small subunit processome component, first KH domain, eukaryotesInterproscan
IPR004087DomainK Homology domainInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR048548DomainKRR1 small subunit processome component, second KH domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12581HIV-1 REV BINDING PROTEIN 2, 3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06961KRR1; ribosomal RNA assembly protein-Ribosome biogenesisko03009deepkoala

TOP