Detailed information of FUN_027749-T1 in Acropora pulchra

Genomic Location: ptg000021l:9973207...10054576
NR annotation: XP_044165687.1, LOW QUALITY PROTEIN: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4LDE5Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SVEP1 PE=1 SV=3
A0A1D5NSM8Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Danio rerio OX=7955 GN=svep1 PE=1 SV=1
Q96PZ7CUB and sushi domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CSMD1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000900 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12661
all species →		hEGFHuman growth factor-like EGFDomainInterproscan
PF02494
all species →		HYRHYR domainDomainInterproscan
PF00008
all species →		EGFEGF-like domainDomainInterproscan
PF00084
all species →		SushiSushi repeat (SCR repeat)DomainInterproscan
PF07699
all species →		Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF00354
all species →		PentaxinPentaxin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR035976
all species →		Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR003410
all species →		DomainHYR domainInterproscan
IPR000436
all species →		DomainSushi/SCR/CCP domainInterproscan
IPR051830
all species →		FamilyNeurogenic locus notch homologInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR013032
all species →		Conserved_siteEGF-like, conserved siteInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001759
all species →		FamilyPentraxin-relatedInterproscan
IPR011641
all species →		DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24033
all species →		EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_027749-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP