Gene detail

Detailed information of FUN_027975-T1 in Colpophyllia natans

Genomic Location: contig_66:1683154...1683780
NR annotation: XP_020624005.1, charged multivesicular body protein 4b-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A2VDY3	Charged multivesicular body protein 4a OS=Bos taurus OX=9913 GN=CHMP4A PE=2 SV=1
Q6IQ73	Charged multivesicular body protein 4c OS=Danio rerio OX=7955 GN=chmp4c PE=2 SV=1
Q5XGW6	Charged multivesicular body protein 4b OS=Xenopus laevis OX=8355 GN=chmp4b PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03357	Snf7	Snf7	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005024	Family	Snf7 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22761	CHARGED MULTIVESICULAR BODY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007034	Biological Process	vacuolar transport	Interproscan
GO:0000815	Cellular Component	ESCRT III complex	Interproscan
GO:0005771	Cellular Component	multivesicular body	Interproscan
GO:0006900	Biological Process	vesicle budding from membrane	Interproscan
GO:0009898	Cellular Component	cytoplasmic side of plasma membrane	Interproscan
GO:0032511	Biological Process	late endosome to vacuole transport via multivesicular body sorting pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12194	CHMP4A_B, SNF7, VPS32A_B; charged multivesicular body protein 4A/B	-	Exosome	ko04147	deepkoala