Gene detail

Detailed information of FUN_028079-T1 in Siderastrea siderea

Genomic Location: contig_28:2697369...2700365
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01176 all species →	eIF-1a	Translation initiation factor 1A / IF-1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006196 all species →	Domain	RNA-binding domain, S1, IF1 type	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR039294 all species →	Family	Probable RNA-binding protein EIF1AD	Interproscan
IPR001253 all species →	Family	Translation initiation factor 1A (eIF-1A)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21641 all species →	TRANSLATION INITIATION FACTOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0006413 all species →	Biological Process	translational initiation	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15025	EIF1AD; probable RNA-binding protein EIF1AD	-	Translation	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.