Gene detail

Detailed information of FUN_028266-T1 in Acropora pulchra

Genomic Location: ptg000021l:17426919...17441918
NR annotation: XP_029206097.2, LOW QUALITY PROTEIN: dynein axonemal heavy chain 8-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_028266-T1

ATGGAACAGCCGTTCAAACTTGCTTTACACGTTGAAATCAAAACCTGGAAGCTATTATTTGGCCACAGCATCAACGCTAAATACAAACAAGAAATGGATGAAATCACTCAATTCGTGTCTGATTACAGCAAGCGACTCGGGCGGCAGATCAATGATTTGGAAGACGTGAGGAATGCAATGGCTGCTCTTGAAGATATCAGACAGAATGAGATTCGAATCGACATGATCCTTGGACCAATAGAGGAAGCATACTCCATGTTAAACAGGTTTGAAGTGTCAGTAGCTCGCGAGGAAGTGGATGGTGTTGACACTCTTAGATACTCCTTCGAGAAGCTTCTTGCTCAAGCGGGACAAGTACAAACTCACTTGGTCAAGATTCAACCCAAGTTCAAAGAAGATTTACTGGATCGAGTTGTGGTGTTCCGAGATGACTCCACTTGCTTTATGTCAGAGTACGATGAGGCTGGTCCAATGGTGACTGGTATCTCTCCACAAGAAGCCAGCGAAAGACTGAACACATTTCAGACTCGTTTCGATGAACTTTGGCGTAAGTACGTCACTTACTCGGGCGGGGAACAATTGTTTGGTTTGCCTGTGACAGAATATCCTGAACTCGCTCGCACTAAGAAAGAGCTGGGATTGCTGCAGAAGCTGTATGGCCTTTACAATGCTGTCATTGATGGTGTCAACGGTTACTATGACATCTTGTGGACGGAGGTCGACATAGAGAAAATCAACAATGAGCTCCTCGATTTTCAGAACAGGTGTCGAAAGCTTCCAAAAGCTTTGAAGGAATGGCAAGCATTCAACGAATTGAAGAAGAAGATCGACGACTTCAACGAATGTTGCCCTCTTCTGGAGCTGATGGCCAACAAAGCCATGAAAGAGCGGCACTGGGACAGATTGGCGAATGTCACAGGGCACAAGTTTGACGTGGAATCAGAAAACTTTTTGCTGAGGAATATTATGGAAGCTCCGCTGCTAGAAAACAAAGAAGATATTGAAGACATCTGCATCTCTGCGGTAAAAGAGAAGGACATCGAGGCAAAGCTGAGTCAGGTCGTAGCAGAGTGGAAGTCTCAATCGTTCAGTTTTGGAACGTTCAAAAATCGCGGGGAGTTACTACTGAAAGGAGGTGAAACCACAGAAATCATCTCTCTCCTTGAGGACAGTCTTATGGTGCTGGGCTCTTTGCTTAGCAACAGATACAATGCGCCATTCAAAAAAGACATCCAGGCGTGGGTACAGAAGCTGTCCAACACCTCAGATATTATCGAAAATTGGATGATTGTTCAAAACCTGTGGGTTTACTTGGAAGCCGTGTTTGTAGGCGGTGATATTGCAAAGCAACTACCACAGGAAGCCAAGCGCTTTGCCAACATCGACAAATCGTGGGTCAAGATTATGACACGTGCTCATGAGACCCCTAACGTGGTCACGTGTTGCGTGGGTGATGACACCTTAGGTCAGCTGTTGCCCCATTTGTTGGAACAACTCGAGTTGTGTCAGAAATCACTGACTGGGTATCTTGAAAAGAAGCGTCTCGTGTTTCCCCGCTTCTTCTTTGTTTCTGATCCCGCTTTACTGGAAATTCTCGGACAAGCCAGTGACTCACACACCATACAGGCTCATCTCCTGAACGTCTTCGACAACATTAAAAACGTGGAGTTTCACGAGAAGGACTATGACAGAATCTTGGCCATTATCTCATCTGAAGGCGAAACTGTCCACTTAGAGGCTCCAGTTATGGCAAAGGGTAACGTGGAGCTGTGGTTGGGAGAGTTGCTGAATCAATCCATGAATTCACTGCATGGTGTCATCAGGGACGCATATCACGCTATTAATGATGGAAGTTTTAATCTCATGGGCTTTCTTGGACAATTTCCTTCTCAGGTTGGTTTATTAGGCATTCAGATGATTTGGACCAGAGATGCTGAAGAGGCTCTGAAACACGCGCGATCAGACAAAAAGGTCATGGCGGCAACAAACCAAAAGTTCCTGAATCTATTGAATTCGCTGATTGAGGTCACGACACAGGAACTCACTAAGATGGAGCGGACCAAGTTTGAAACCTTTGTCACCATTCATGTGCATCAGAGAGATATCTTCGACGACTTGGTCAAGATGCATATCCGCTCAGTTACGGACTTTGAGTGGCTGAAGCAATCTCGATTCTACTTCAAGGAAGACATCAATGATTGTATCATCTCCATCACAGACGTGGACTTCAGTTATCAAAACGAATTTTTGGGTTGCACAGACAGACTTGTTATTACTCCGCTAACCGACAGATGCTATATCACACTAGCTCAGGCACTGGGCATGTCCATGGGAGGTGCGCCCGCTGGCCCTGCTGGAACTGGCAAGACTGAAACAACTAAAGACATGGGAAAGGCCCTTGGAAAATATGTGGTTGTATTCAATTGCTCTGATCAGATGGACTTCAGAGGACTTGGCCGAATTTACAAAGGATTAGCACAGTCTGGAAGCTGGGGTTGCTTTGACGAATTCAATCGTATCGAGCTGCCTGTACTGTCAGTAGCAGCTCAACAGATCTACATTGTGTTAACCGCTAAGAAAGACAGAAAGAAACAATTCGTGTTCACGGATGGCGACGTAGTTGATCTTAATCCTGAATTTGGTATTTTTTTGACTATGAACCCAGGATATGCGGGTCGTCAGGAATTACCTGAGAATCTCAAAGTGCAATTTCGCACAGTCGCCATGATGGTTCCTGACAGACAGATCATCATGCGCGTCAAACTAGCAAGCTGTGGTTTCATAGAGAACGTGATTCTGGCTCAAAAATTCTTTACTCTGTACAAACTATGCGAGGAGCAGCTCAGCAAACAGGTTCATTATGACTTTGGATTAAGGAATATCCTATCAGTTCTGCGTACACTGGGTGCAGCAAAGCGTGCTAACCCCCAAGATAGCGAGAGCACCACTGTCATGAGAGTGTTGAGGGACATGAACCTTTCCAAATTGGTGAGACAGTGA

Transcript

FUN_028266-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q91XQ0	Dynein axonemal heavy chain 8 OS=Mus musculus OX=10090 GN=Dnah8 PE=1 SV=2
Q96JB1	Dynein axonemal heavy chain 8 OS=Homo sapiens OX=9606 GN=DNAH8 PE=1 SV=2
Q8TE73	Dynein axonemal heavy chain 5 OS=Homo sapiens OX=9606 GN=DNAH5 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000596 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08393 all species →	DHC_N2	Dynein heavy chain, N-terminal region 2	Family	Interproscan
PF12774 all species →	AAA_6	Hydrolytic ATP binding site of dynein motor region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042222 all species →	Homologous_superfamily	Dynein heavy chain, domain 2, N-terminal	Interproscan
IPR042228 all species →	Homologous_superfamily	Dynein heavy chain, linker, subdomain 3	Interproscan
IPR026983 all species →	Family	Dynein heavy chain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR013602 all species →	Domain	Dynein heavy chain, linker	Interproscan
IPR043157 all species →	Homologous_superfamily	Dynein heavy chain, AAA1 domain, small subdomain	Interproscan
IPR035699 all species →	Domain	Dynein heavy chain, hydrolytic ATP-binding dynein motor region	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46532 all species →	MALE FERTILITY FACTOR KL5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005858 all species →	Cellular Component	axonemal dynein complex	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0030286 all species →	Cellular Component	dynein complex	Interproscan
GO:0045505 all species →	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959 all species →	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_028266-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.