Gene detail

Detailed information of FUN_028357-T1 in Dendrogyra cylindrus

Genomic Location: contig_69:1257449...1281846
NR annotation: XP_020630978.1, poly [ADP-ribose] polymerase 14-like [Orbicella faveolata]
Species abbreviation DCYLI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_028357-T1

ATGGCGTGCAGGCAAACCGAAACACCGAATACAGCAAGTAACGTCGAGGGGCGAAAAGATCTGGAGCGTATCAATGTTATGTTTCTCTGCGACGAGTGGAAGTCTTCAAAGGGTGGTCTGTCCACTTTCAACAGAGAATTTGCTGTTAATTTGGCAAAAACTGCGAGTGACAGCATCAAAGTTCACTGCTACGTTTCGCAAAGCGATGAGCCGGACAGAGAAGATGCCAGACAACACGGAGTGAATTTAATCACTGCTCGAAGTATCCCAGGATGTACTGACCCACTGGATTGGTTGAAAACTCCACCACCGGAACTATTAAATCCTGACATTGTGATAGGCCATGGAAGAAAATTCGGCACTTCTGCATGTTTCATTGTCCAGGCTGCAAAGTGCAAATGGATTCAGTTTGTCCATGTGTTTTGTGAAGACCTTGGAAAGTTCAAAGTAACACATGATGTTTTACTTGATTCAATCGAAGAAAACGAAAAGAAACATAAAATTGAAATTCAGCTGTGTAAAGCAGCAGATTTAGTTGTCGCTGTGGGTTCACGACTTCAACAGAAGTACAACAGAAGTCTCCCAAGTGTTAAGGTGGAGATCATCACTCCTGGGATTATCGAAACGTTTGACATTGAATCATCGAAGCTGGTCAAAGACAGATCAGTGGCAAAGAAGTTCAATGTCTTCATGTTTGGTCGAGCAAGCTTTGAAGATCTTACCCTCAAAGGTTATGATATTATTGCAAATGCCATAGGATCCCTTGGCAAGATGTTTGAGCTGACATTTGTTGGTTCGTCTCCTTCTGAACACCGAAAAATTGAACAATGGTTTCTTAACAACACATGCATAACCCGCAACCAATTAACAATCCGCAGTTATTGTAATGAACAAGATGAACTTAAGATGATGTTTCATGAGTCAGACATGGTTGCGCTTCCATCACGCACTGAAGGGTTTGGTTTGGTTGCCCTGGAAGCCATTTCTGCTGGCATTTCTGTTCTTGTTGCTGGTGAATCAGGAATAGCTGAGGCTTTGCAAGAGGTAGAAGGCGGGGAGTCTGTTATTGTTGAATCAGATGATGCTGAGGACTGGGCCCGAAGGATCCAGCAGCTGTCAAATCAAAGTTGGCAAGATAGAGAAAACGATGCCAAGCTGCTCAGAGAGAGCTACAACAAAACTCACTCTTGGAGCAATGAATGTGAGAGATTTAAAAGGATGATTCAGGATGCTTTGAAAATACGGATTGATGTGGAAACCATGAAACTTGCAGAACACAGCACACAGCATAAAACTTCTGTTTCAAGAGGACTGCAAAATGGTGGGCACCAGGGGGCATCTGCAGTACATGTACCTCTGACATCAGGAAATACCCAGCCTTCTTGTACAGAGGCTGAAGTTTTTCAAGCACCCAATCTCATTACAACAGCTGAAGGAGTATTGAGCTTAATTGCTACAAACTACTTGCTAAGTACGCCACCAAGGAACAAGGGTGAACATGATGACTTTTTGACTTACATGAAAGAAATGCGAGTCAATATTACAGGTGTTCGCATTGGAAGTTTGCTGATAACAGTGAGATGTTATTCACTTCAGATCTTGCAGAGACTGTGGGAAGATTATTCATCTGGCCATCTTAGCGAAGTGGTTCAAAGATGCTTTGTGACGGAAGAGATCTTGACAGAATTGAGCCTTGCAGAGTTAAAGCTAAAAACAACAATCCTAAACGAGGAGTATGAAGCATGTAAAGTATACTTTGAGAAAGAAACAGCCAGAGATTTCAGTAAATTCAAGACCAACAGCGAAAGAAGAAGCTTGGATTCTGCTAAGGTTTGCATCGAACAAGTCCCTGTTTGTAGAAGCATTCTTGTCAGCGGTCTTTCTGAGAACACTACCCTTGATGCCATTCAACTGCACTTTGAAAGCCAAAGAAACAGTGGGGGTCCTGTGGAAAAGGTACACTTTGTACCTAAAAGTGGGCGAGCTGTGGTTGTGTTTCATGATCCAAGAGATATGAAAAGAGTGTTAGCCAAACATGAAGAAAAACCGCACGTCTTAAACAAAGCGCAGCTGTCAATCAGAATATACCAGGAGTTTCTAGAAGACGAGGACGACGATGTGTCAGACGATTCAGATGGACTGGGTGTGAATGCAGTTGGTGCTGATAAAGCTCAAGTGAGCCAGCAGTCTGAAACTAAAACACAGCAGCTGCACATGGCTGTTGACCCGGATGTAATGGAATTCGTCACCACTACAGCATTGAGTGATCAACTAAACAAGTCACTagctttgaaaaagagtgaaattACCTGGAAACCTCACAGCAAAATGGCCTTAATAGTGTACCGAGGAGAGGACGACGGTGATTCCTGGCAGTCTGAGTGCATCGATGAAGTACAAAACTACCTCGGAAAATTTACGAAGTGCGACGTTCAagtcaacaaagatttctgggAGGCTGTGGTGGCTCAGTTATCCAGTATTCGCGCCTGTTTGGGGGTAGATCCTCCGCTGGTCAAAACTATCGATGATTCATTTGTGGCTAGAATTGTTTCGCTGAGGACAGATGTGAAAGATTACGAAGAGAAGTTAAAAGCTAAATTAGAAGAGATATACCGAGAGGAAACCAGAAAAACCTATCTGAAAAAGAAAGTTCTTGATGTACCTGAAGAACGGTTAACTCTGTTGAAGAAGATTAAGTTTGTGGAGGAGCTTCAAGAGAAAAACAAGGAGCTTGAAATAAAGTTAGATATCGAAGGCGAGGAAATCTATTTCGAAGGTCCTCAGCCACAGTTTACCGAAGCAACCATGAAGTTCTACAAACAAATGTCGGACATGGTTGAAAAGAAATTGGCTCTGTCCGAAGGCATCTTGCAAGTTTTAGGCTCGGACAAAGGACTGCAGAAAGTCAAACGTGAGCTGGAAACCAACAACGTGGAAGCAGTGTTCATCATCGGTAAAGACGCCAGGATCATTGGCACGTCAGCTTCGCATGCGGACAATGCCACAAGCCACGTGAACAAGTTGGTGTTGGAAGAGAAAGTTAAAGTGGATGATAAGAGTAAATACTTGTTAAAAACACAAGAATGGCGCCAGTTGTGCGAGGAAATCAACGGGGAAACTGATGTGCGTGTTTACAGGAACAACTGGAATGACACCTACGTTTTTGGCTTTCGCGATGATGTCATAGAAGTGATGAAGAAGCTAAATACCTTCTTGGAAACCAGCTGCATCAGGGAAGAACAGTTTATATGTACTTCCCAAATTGTCCGTAGGTATCTTGCTGAGCTTCGTCAGGAAGATTTACGCTCCATTGAAAATCAACTGAAAGATTTTGATGTGAAGATTAGGAAAGGAAAAGGTGACGATGATTTTGACATTTCTGGAAACAAAGAAGGCTTGACCAGGGTAAGGAAGAAGCTTGACGCTCTTATAAGAAACACCGAGTCAGAGACGTTTGACGTGAACCAGCCAGGCGTCCGAAAGTTCTTTGACAGCGGAAAAGGAGATCGTCTTGTGAAatcggtggaaagggatcaagaTTGTGCGATTGAAGtccaaaaaaatttcaaccaAAGGGGAGATGGCTTGGGCACACAAGCAGCGGCTGATTCTGATTCTGATTCTGATTCTGCTTATTCTGGAAGTCACGACAGTGACCGTAGTGAgaatgatgacgacgacgaggCCGCCGTTTGCGGGGCTGATGAGTCTGTCTTGGTAATGACTCAAGGCCAGAAAATAACATGGAAAACTGGAAGCATTGAAACGGAGAAGGCCGATGCATTGGTCAGTTTACACGAGGCATCCTTTCAAGCGGTTATCAATGCTGGTGTTCCTGCCATGGCAACTCCAAACGTTGGAGACATCACTGTCTCGCCTGGCTATCCCTTGGCCAGTCACGTGATCCACACTAACTGTTGCCAGTGGCACGGTGGCAAAGGAGAGGCGACTCTACGGGCCATCGTCCAAAAGTGTCTGCACAAGGGCGAAGAGCTTGGAGCGAGGTCCATTGTATTTCCTGTCATAGGCACTGGAAAACTGAACTTCCCACACGATGTAGTCTCAAGAATCATGTTAGAAGAAACGACCAGCTTTTGCCAAGCTAATCCAGGTTCTAACTTGCAGGATATTCGATTTGTCGTATATGAACAAGATAACGTATTAACTGAAGCCTTCAACCAAGAGATGGACAAATTGCAAGCAAAGCACCAATCCGGTCCTGTGGGTCGTTTTATAAGAAGTCTTCGTTCTAAATTCAGACGAGGGGTGGCAGGATACACAAGGCGTGTGAGCATCGAGGTTCTGCAAGGTGACTTGTGCCAGGAGACAACAGACGCCATTGTGAATATAACAAGCAAAGATATGAATATGGAGACTTCGGGAGCGTTAAGCAAGGCAGTGAAGCGGGCCAGCGGTCCACAAGTGCAGGCCGAGTGCAATCAGCTGGGACAACAGTCAGGTGGGACAGCGGTAATCACCAGTGGTGGGAATTTACCAGCGAGTCACATCATTCATTTGATCCCAGACTCTGCACAGAAGGATCACTTACAGCAGTGCGTGGAAAGATGTTTTCGCCTTGCTGAAACATATGGTCTTCAGTCCATATCTATCCCAGCAGTGGGAACTGGAGCATTTGGCTTGTCTGCTGCCGACTCGGCTAGCCTGATATTCAAAGCTCTTGGCAACGTTAGTGGAAGTTTAAACACCATTCGTAAAGTCAGGATCGTAATCTTCCAAACTCAGATGTTGCAGGCATTTCAGCAGGAGCACCAAAGACACTCGTCGCATTCTAGCGATGGTGTGACGTCACACATTGGTGTGGATCGTCATTTCAGTGTAGAGGTCATAAATGGTGATCTGACTCAACAGGATACCGACGCCATTATGAATATCAACAGCACAGATATGAACATGAATAACGCTGGAGAGTTAAGCAAAGCAATTGCAAACAAGGGCGGGGCACAGGTGCAACAAGAGTGTAACCAACTGGGAAGGCAGTCCGCAGGCTCAGCTGTGATGACCAGTGGAGGGAACTTGAAAGCTCCTCACATCATTCACATAATTCCAGGCTCCTCAGATAAACAACATCTTCAGCAATGTTTGGAACAGGGTCTTCGCCTTGCAGATACAAACAACCTCAGATCGATCTCCATTCCAAGTGTTGGCACCGGCAGATATAGCCTGGCCGCGGCGGACTCGGCTCAAGTGACGTTTCAAGCGCTCAACAGCTTCAGTGGTAGTTGTAAAAGTGTTCGCAAAGTGAGGGTGGTTGTATTTCAAGCTCAAATGCTGCAGGAATTTCAGCAACAGCTGCAGGCACAACCAATGCGAGATTTGGATGATGAAGAAAGCGATTCTTCCTCAGATGACGCAGACGCCAGGCCCTCAAGGCAAACACAGCGCTCAAGTCACGAGCACTCTATAAGCATTTGTGTCATTGGCAAGACCAAGCCAAGTGTGGGAAAAGCCGTGGAATCTTTGAAGAAAGGTTTCTCTGAAGCTTGTACGACGCAGAAAGTCGAAAATGAAGTCATTAGTCAACTTTCTCGTAAGCAGATTAACGGTCTGAGAAGAAAAGCCGACGATCTTGACGTCAAACTTGAAGTCGAGACCGAGGTTGATCGTATTGTCCTACAAGGTCAACCGACTGAAGTGTCCAACATGATCGGGGAAATCTGGAAAGAGATAAGAGAGACGACAAAGAAGAAACAAGAGGAAGAACAGGCGCTGCTGGTGTCAAAAAACATAGAATGGAGTTATGAAATACATGGCAGCAAAATGGTTTTTGGTCCGAAAACAAACGTGAAGATTGAAATGGCTTACAGCAAAGATGAGCCAAGAGTACAAGTGTCTTTGCGAGCAGATCAGTTTGTAATCGATTTGAAGGCAAAAACTGGCCGCGGACAAAGATCTGGTGAACAAATAACACTGGCTAGGAAGGTAAAGGAAGAAATTACTCTTCCCAAACACTGGACGCCAATGCCACGCCCTGACATGACAGTACACACGGTACCTCTCTCCCCAAGTTCCCCTGAGTACCAGTATGTTGTGCGCAAATTTCAAGCGACTGCTGACGGAGTAAATATACTAAAAATCGAACGAATACAGAATCCTCTACTTTACAAGTCTTACATGGTAAGAAGACAGAAGATGGACAAAGATACTAGAGGAAATAGTGAGCGACAGTTGTTCCATGGAACCGATGGTAAACATATCAGCCACATAAACACTATGGGATTCAACAGAAGCTTCTGTGGAGCCTACGGAAGTTCCTTTGGTCGCGGTGTGTACTTTACAAGAGATGCCCAATACTCAGTTGGATACGCAGCCGGTGGTGTTGGGGGTCGCTACATGTACCTTGCCCGGGTCCTGGTCGGGCAGTATTGTGAAGGGAAATCTTCTATGATCGTACCTCCGCCTAAAAACCCCTCCAAGCCGGAAGTTCTTTATGATTCTGTTGTAGATCAGATGGAAAGTCCAAGCacatttgttgttttctttgataATCAGTGTTACCCCGAATACCTTATAACCTTCTAG

Transcript

FUN_028357-T1

Protein

FUN_028357-T1

MACRQTETPNTASNVEGRKDLERINVMFLCDEWKSSKGGLSTFNREFAVNLAKTASDSIKVHCYVSQSDEPDREDARQHGVNLITARSIPGCTDPLDWLKTPPPELLNPDIVIGHGRKFGTSACFIVQAAKCKWIQFVHVFCEDLGKFKVTHDVLLDSIEENEKKHKIEIQLCKAADLVVAVGSRLQQKYNRSLPSVKVEIITPGIIETFDIESSKLVKDRSVAKKFNVFMFGRASFEDLTLKGYDIIANAIGSLGKMFELTFVGSSPSEHRKIEQWFLNNTCITRNQLTIRSYCNEQDELKMMFHESDMVALPSRTEGFGLVALEAISAGISVLVAGESGIAEALQEVEGGESVIVESDDAEDWARRIQQLSNQSWQDRENDAKLLRESYNKTHSWSNECERFKRMIQDALKIRIDVETMKLAEHSTQHKTSVSRGLQNGGHQGASAVHVPLTSGNTQPSCTEAEVFQAPNLITTAEGVLSLIATNYLLSTPPRNKGEHDDFLTYMKEMRVNITGVRIGSLLITVRCYSLQILQRLWEDYSSGHLSEVVQRCFVTEEILTELSLAELKLKTTILNEEYEACKVYFEKETARDFSKFKTNSERRSLDSAKVCIEQVPVCRSILVSGLSENTTLDAIQLHFESQRNSGGPVEKVHFVPKSGRAVVVFHDPRDMKRVLAKHEEKPHVLNKAQLSIRIYQEFLEDEDDDVSDDSDGLGVNAVGADKAQVSQQSETKTQQLHMAVDPDVMEFVTTTALSDQLNKSLALKKSEITWKPHSKMALIVYRGEDDGDSWQSECIDEVQNYLGKFTKCDVQVNKDFWEAVVAQLSSIRACLGVDPPLVKTIDDSFVARIVSLRTDVKDYEEKLKAKLEEIYREETRKTYLKKKVLDVPEERLTLLKKIKFVEELQEKNKELEIKLDIEGEEIYFEGPQPQFTEATMKFYKQMSDMVEKKLALSEGILQVLGSDKGLQKVKRELETNNVEAVFIIGKDARIIGTSASHADNATSHVNKLVLEEKVKVDDKSKYLLKTQEWRQLCEEINGETDVRVYRNNWNDTYVFGFRDDVIEVMKKLNTFLETSCIREEQFICTSQIVRRYLAELRQEDLRSIENQLKDFDVKIRKGKGDDDFDISGNKEGLTRVRKKLDALIRNTESETFDVNQPGVRKFFDSGKGDRLVKSVERDQDCAIEVQKNFNQRGDGLGTQAAADSDSDSDSAYSGSHDSDRSENDDDDEAAVCGADESVLVMTQGQKITWKTGSIETEKADALVSLHEASFQAVINAGVPAMATPNVGDITVSPGYPLASHVIHTNCCQWHGGKGEATLRAIVQKCLHKGEELGARSIVFPVIGTGKLNFPHDVVSRIMLEETTSFCQANPGSNLQDIRFVVYEQDNVLTEAFNQEMDKLQAKHQSGPVGRFIRSLRSKFRRGVAGYTRRVSIEVLQGDLCQETTDAIVNITSKDMNMETSGALSKAVKRASGPQVQAECNQLGQQSGGTAVITSGGNLPASHIIHLIPDSAQKDHLQQCVERCFRLAETYGLQSISIPAVGTGAFGLSAADSASLIFKALGNVSGSLNTIRKVRIVIFQTQMLQAFQQEHQRHSSHSSDGVTSHIGVDRHFSVEVINGDLTQQDTDAIMNINSTDMNMNNAGELSKAIANKGGAQVQQECNQLGRQSAGSAVMTSGGNLKAPHIIHIIPGSSDKQHLQQCLEQGLRLADTNNLRSISIPSVGTGRYSLAAADSAQVTFQALNSFSGSCKSVRKVRVVVFQAQMLQEFQQQLQAQPMRDLDDEESDSSSDDADARPSRQTQRSSHEHSISICVIGKTKPSVGKAVESLKKGFSEACTTQKVENEVISQLSRKQINGLRRKADDLDVKLEVETEVDRIVLQGQPTEVSNMIGEIWKEIRETTKKKQEEEQALLVSKNIEWSYEIHGSKMVFGPKTNVKIEMAYSKDEPRVQVSLRADQFVIDLKAKTGRGQRSGEQITLARKVKEEITLPKHWTPMPRPDMTVHTVPLSPSSPEYQYVVRKFQATADGVNILKIERIQNPLLYKSYMVRRQKMDKDTRGNSERQLFHGTDGKHISHINTMGFNRSFCGAYGSSFGRGVYFTRDAQYSVGYAAGGVGGRYMYLARVLVGQYCEGKSSMIVPPPKNPSKPEVLYDSVVDQMESPSTFVVFFDNQCYPEYLITF

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2EMV9	Protein mono-ADP-ribosyltransferase PARP14 OS=Mus musculus OX=10090 GN=Parp14 PE=1 SV=3
Q460N3	Protein mono-ADP-ribosyltransferase PARP15 OS=Homo sapiens OX=9606 GN=PARP15 PE=1 SV=2
Q53GL7	Protein mono-ADP-ribosyltransferase PARP10 OS=Homo sapiens OX=9606 GN=PARP10 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000168 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20694 all species →	TRADD-like_N	TRADD-like N-terminal domain	Domain	Interproscan
PF01661 all species →	Macro	Macro domain	Domain	Interproscan
PF20706 all species →	GT4-conflict	Family 4 Glycosyltransferase in conflict systems	Family	Interproscan
PF00644 all species →	PARP	Poly(ADP-ribose) polymerase catalytic domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043472 all species →	Homologous_superfamily	Macro domain-like	Interproscan
IPR002589 all species →	Domain	Macro domain	Interproscan
IPR012317 all species →	Domain	Poly(ADP-ribose) polymerase, catalytic domain	Interproscan
IPR037197 all species →	Homologous_superfamily	WWE domain superfamily	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR004170 all species →	Domain	WWE domain	Interproscan
IPR049341 all species →	Domain	TRADD-like N-terminal domain	Interproscan
IPR052056 all species →	Family	Mono-ADP-ribosyltransferase ARTD/PARP	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14453 all species →	PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003950 all species →	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0010629 all species →	Biological Process	negative regulation of gene expression	Interproscan
GO:0070212 all species →	Biological Process	protein poly-ADP-ribosylation	Interproscan
GO:0140289 all species →	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404 all species →	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_028357-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.