Detailed information of FUN_028851-T1 in Acropora pulchra

Genomic Location: ptg000022l:5015455...5020190
NR annotation: XP_029201467.1, alpha-amylase 2-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q09840Alpha-amylase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=aah2 PE=1 SV=1
Q02905Alpha-amylase A OS=Aspergillus awamori OX=105351 GN=amyA PE=3 SV=1
Q02906Alpha-amylase B OS=Aspergillus awamori OX=105351 GN=amyB PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010134 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00128
all species →		Alpha-amylaseAlpha amylase, catalytic domainDomainInterproscan
PF09260
all species →		A_amylase_dom_CAlpha-amylase, domain CDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013777
all species →		FamilyAlpha-amylase-likeInterproscan
IPR013780
all species →		Homologous_superfamilyGlycosyl hydrolase, all-betaInterproscan
IPR006047
all species →		DomainGlycosyl hydrolase, family 13, catalytic domainInterproscan
IPR015340
all species →		DomainAlpha-amylase, domain CInterproscan
IPR017853
all species →		Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10357
all species →		ALPHA-AMYLASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004556
all species →		Molecular Functionalpha-amylase activityInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0016052
all species →		Biological Processcarbohydrate catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_028851-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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