Detailed information of FUN_029139-T1 in Acropora pulchra

Genomic Location: ptg000022l:8562336...8573564
NR annotation: XP_029196985.2, transient receptor potential cation channel subfamily V member 6-like isoform X1 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H1D0Transient receptor potential cation channel subfamily V member 6 OS=Homo sapiens OX=9606 GN=TRPV6 PE=1 SV=3
Q8NET8Transient receptor potential cation channel subfamily V member 3 OS=Homo sapiens OX=9606 GN=TRPV3 PE=1 SV=2
Q9R186Transient receptor potential cation channel subfamily V member 6 OS=Rattus norvegicus OX=10116 GN=Trpv6 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009362 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00023
all species →		AnkAnkyrin repeatRepeatInterproscan
PF08016
all species →		PKD_channelPolycystin cation channelFamilyInterproscan
PF12796
all species →		Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024862
all species →		FamilyTransient receptor potential cation channel subfamily VInterproscan
IPR002110
all species →		RepeatAnkyrin repeatInterproscan
IPR013122
all species →		DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR036770
all species →		Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10582
all species →		TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005262
all species →		Molecular Functioncalcium channel activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0098703
all species →		Biological Processcalcium ion import across plasma membraneInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_029139-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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