Detailed information of FUN_029174-T1 in Acropora pulchra

Genomic Location: ptg000022l:8975982...8982829
NR annotation: XP_015780142.1, PREDICTED: synaptophysin-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P07825Synaptophysin OS=Rattus norvegicus OX=10116 GN=Syp PE=1 SV=1
Q62277Synaptophysin OS=Mus musculus OX=10090 GN=Syp PE=1 SV=2
P08247Synaptophysin OS=Homo sapiens OX=9606 GN=SYP PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007373 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01284
all species →		MARVELMembrane-associating domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008253
all species →		DomainMarvel domainInterproscan
IPR001285
all species →		FamilySynaptophysin/synaptoporinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10306
all species →		SYNAPTOPHYSINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0008021
all species →		Cellular Componentsynaptic vesicleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_029174-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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