Gene detail

Detailed information of FUN_029425-T1 in Acropora pulchra

Genomic Location: ptg000023l:1760688...1770853
NR annotation: XP_015775470.1, PREDICTED: protein KRI1 homolog [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8N9T8	Protein KRI1 homolog OS=Homo sapiens OX=9606 GN=KRI1 PE=1 SV=3
Q0V8M0	Protein KRI1 homolog OS=Bos taurus OX=9913 GN=KRI1 PE=2 SV=3
Q6DRJ4	Protein KRI1 homolog OS=Danio rerio OX=7955 GN=kri1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004358 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05178 all species →	Kri1	KRI1-like family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018034 all species →	Family	KRR1 interacting protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14490 all species →	ZINC FINGER, ZZ TYPE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000447 all species →	Biological Process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0030686 all species →	Cellular Component	90S preribosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14786	KRI1; protein KRI1	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.