Gene detail

Detailed information of FUN_029464-T1 in Acropora pulchra

Genomic Location: ptg000023l:2107242...2140371
NR annotation: XP_044163998.1, uncharacterized protein LOC114961314 isoform X3 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_029464-T1

ATGGCGGACTCTTCTTCATCGCAGTACGACCAGGAATCGAAGAAAGAAGCTCGATCAAAGCTCATCGAACATGCCGTAAGATGTCTCACAAAGGAAAGGAGTACTTCGGTTTGTGTGAAACGAGATGATGTTGCACGAGTTTGGAAACAACTTCATGAATCTGGAAAAGCTGGGGAATATTTCACAGAAAAAGAAAGACAGGAAATAGAGGAGGAAATTGTTTATTGGGAGCATTTTCACGATAGCCAAGTTCAAACAAGAAGGCCATCTGACCTACGCGTGTGTTATCTTTGTGGTGAGAACCCAATAGATGATCTTGAAGTCCTTGAAGTCCTGGTTACAAATGGCGTTCTTTGCCAGAATGTATGGGCAGTTGAGAAAGATTCGAAAAAATTAGAGAAAGGATGGAATGCGATCAAGAATCCCACATTGAGAAAAGTTAAACTATTCGATGGTGGCTTCCTTACTTTCTTGAAAGATTTCCCAGGACAGTTTGACATAATTTACTTCGATGCCTGCGGTTGTTTACCAGCAGCCAAAGAGAACACTCTGAAGGTCATCGGCTATGTGTTTCTGTACAACAAGCTTACGTCGCCTGGTGCCTTGATTACCAACTTTTCTTTCCCGCCTCAGGATACTCGGCAAGAGAATCCTGCAATTTCACAGGACGTTTATTTAGATAAAGAGAAAGAGATGATAAATGTCCTGGTAAAGGAGTATATGAATTACAGATTGTGTAACGTCTTAGGCAAAGAAAATAACGCAGAATATCTGAGTGAGAGGACTGATGATCATGAAGATAATTACGGAGACTACGTATCTTTTCAAGTTATTGATTCAGCCTATTTGTTTATTCCCGCTCAAAGAATACTGTGGTCAAAAAGGAAATTACTGTTGGGTCAAATCTTTAATTTCTCGTCAGAAGTGGAAAGCACAACCGAAGGCACCAATGAAAGAAGTACCAAAACAACAAGAAATCAAGAATTAATGGCATCACTGGAAGAGTTGAATGAGAAGTATGATAGGTTCCTGCATCAAAGAAAAATGGCAGGAATTGACCTTGAGAAATCAAATTCCTATTGTGAAGCATTTGTTGCTGAAATCTTCCCAGATTTGAAATCTTTGCCAAGGGAAGGAAATTCTTCTGTGCCTTCGACTCCCCTACCGTTTTCCTCTCCACATTACATCATACAGTTTTGTAAGGATTTATCAAAATGTCTTGTGCCACTTTTGAAAGCTGATGTTGATGAAAGGATTTTGAGTTGTTGCGATATGGCAACTCCTGAACAGATAATCTGCCATTTAGCTGATCTTCTTTATGGTCAAATGGCCTACCCATCATTTCCTGTCAGGGATAAGCTGTTTCGTCTCAGGTACACTTATGAGCAGAGGCAGATGTTTGGTGATGTTTTTGTTTTTGACAAGTGCAGGTATCTGTATGATCAATTCCTTTCTGTGGATTGTGCAGGCTTTGCTGAGCGAAAGCAGCAGATTCTATTTACAGTGGTGGTGGATGGTTTATGCAAGCATTTGGGAGGAATTTGTTCGGAAGATCTTTTCAAATTTTGCAATGTTGGACAAGGGTATGCGGTGATTACAGAGGGAGGAGCGATTTTTCCAAACAGTGTGGGGAGAATTCCAGAGAGGCAGAAAATAGAAGATATACTATTTAAAAAAGTAAAGAAAATCCAGGAGGAGGAGATCTCGTATAGCTTTGCTGCAACTGAAAGCCGTTGGGTAGTTACCAGTGCTGATAAGTTACGCTATGATGCTATTTTCAAGCAAGCTGACAAAGACGGAGATGGGCTTGTTTCTGGGGAAGATGTGAAGAGCACATTTATGGCCTCGGTTCTAGATGAGCAAATTCTTGCACACATTTGGGAACTCTGCGACATTACAAACCAAGGGCAGCTAAACTCCGAGGAGTTTGCATTGGCTATGTATCTAATTGACCAAAAGGACATGGGTGTGGATCCACCCCAGATGCTCAGCCCTGAGATGGTGCCACCCTCAAAGAGGGCAAGCAGTGCTGGTGGCCCTGTGGCAGCAGGAGAGGCAACGAGCTCTTTACCTCGATGCATCAGCATGGATTCAGACAGATCTGGAGAGGACAGACAAGACGATGAATTACCGCCTCAAGACACTAGAACTCAGCAGGAAGTGGATCAATGCGTGGGGCTCCACACAGATTTTGTTCAAGCAAAGCATCAGGGTAGCGAGGAAGATTCAGATAAGACGATTGGAATGGAGAAGGCTACTCCTTTATCTCTTGAAGAAGTTGCACTTGATCAGGGAACTGGCGTGATTGGGGCGGCCACATCTGCGGATGACGAGGAAGTGCTGGGTAAGGAGGAAGATTCAGATGAAATGATTGGAATGGAGAGGGCCACTCCTTTATTTTCTGAAGAAGTTGCACTTGATCAGGGAGCTGGCATGATTGGGACGGCCACAGTTGCAGATGACGAGGAAGTGCTGGGTAAGAAAGAGGACACAGACCAGATGGCCAGAATCGCAACCGTTAGAGAGAAAGTCCACGACGATATTCCAGAAGACCTAACCTCTTGTACGCTGGATTACGGCGACGGCAGCCCCTTCAAGAAGACAAATGGAGCCAAGCTCAGCAGACTTCTCATTGATGGTGGAACAATGGTGCTTAGGAAGATTTTCGATAGATATCATCCACCAGCAAATGTGCAGGCTAATCTCAATGCAAACTATGGCACTCTGAACAATCTCTTAAGGAGGAAGGTTTTAAAACAACCTCAGTGGGACCTACTGTTCCCACCTGATGGAGCCACGCCAGACTCCAACACATTCGACATCACTTTGTTATTCCTCCTTCTAACTAGCATTTGTGGACTCTCCCCTCCCCCCTCGGGGTGGCACACTAAGCCGTCCGCGAGTGACACCTCTGTTGAGGCAAACCTTTCTCGCATCAAGTTTTTCCGCAATGAGTTGTACGGTCATGTTACTACCACTGGTATAGATAAAGCTACTTTCTCTACTCTGTGGCAGGAAATTAGTGCTGTACTTGTTGCTCTTGGCTTACCTCAGGCGGAAATTGATAGATTGAAGGCAGAACATTGTGGAGAGGAAGACTTTCTTGACGTGTTGTTTAAGTGGGCTGACAGTGAAGAGGACATCAAGTCACAGCTCAGGGACATACGTCAATATCAAGCAAAAATCAAGGAAATAGTGGAGGATGTACTTAATTTGCAATCTGTAGCTCTTACACCGGAAACTATTGATGAAAATCGTCAGACCCAACTAGGAGATCGTGGAACCGTGCGAGACAACAAAGTTGACACGAAGTTGCAAGAAGACGTGGAAGTTCAAAAAGAAAAGAACAGAGAAAATGAAATACTGAATAAACTCGCAAAGATTGAGACCCTGAAAGACGTAAGAAATCACGCTGACAGATACGTTGACGGAACCCGTTTGTCATTCTTTTCAGCTGTGGACAGCTGGCTAAATGACAGAAGTTGCCCAAATCGTGTGATGGTAATTAGTGGAAGTGCTGGGATGGGAAAGTCTGTTATCTCAGCTGTTATTTGTGAGAAGATGCAACATGCTGGGCGGCTAGCTGGAAGTCACTTTTGTCAGCATGACAGGGCGCGCCACATTAATCCCAAGGTCATGCTACAGTCCTTAGCCAGTCAGCTTTGTGATATTCTGCCAGAGTACAAGAAAGCTCTCGTGGAAACGTCAAGAAATCTTAGTGTGGAGATTAACGACATGGAAGTGAAGGATCTGTTCAAAGTGCTGTTTGAAGAACCTCTAGCCAGCTTGAACGACTCTAGTTTGGCCTATCTGATTGTGATAGACGGCTTGGATGAAAGCGAGTTCAAAGGAAGAAATGAGTTTCTAGACGTAATTGCTAATTACTTCCAAAGTCTTCCATCGTGGATTCGATTTCTGGTGACGACGCGACCAGAAATAAACATTGCAGAAAATCTAAAGGATTTGCACCCCCTGCAGCTGGATCCAAACGTTGAAGAGAACGTCAAGGATATTTATCTTTTCTTTGACAAACAAATCGGCCATTTATTGCAATCTGAGCATCAGGAAATCGTCTTGCGAGCACTGGTTCAAAAGTCAGAAGGAGTTATGCTATATGCTCATTACCTGGCTGATTTCATAAAGAAGGAAATGCCAGTTTTAACCCCTGAACTGCTGGACAGCATTTTGCCATCAGGTATTTCGCCTGTTTATGACTCGTATTTCAAGCGTCTGGAGACTGAACTTTGTACGGAACTAAGCGTCATGGAAGATCCATTTTTGACATTTCTTAGTGCGGTCGCAGCTTCAAGAGAGCCATTGCCACTCGGTTTCGTTTCTAAATTGTTGTTACCTGGTAAATCGACTCCAGCGGCTCACCGAAAAGAAGACGCGGCAATTTCTTGTGTTTCAGCACTTCTACCTGTCCAAGACGGGTGTATTCACGTCTTTCACAAGTCGGTGAAACACTGGTTGATTGACAAATCTAACTACGGACAGCACCACTTCAGTGTAGACGAAAAAGAAGGGCATGAAGTCCTTTCTAAGCTCTGCATTGATGAGCTTCATGAGTTGAAACGAAAAGGCGTTGAGGGCGCACAGTTCAGTGACATTACAAAGTACGCTCTGCGACATGGTGTTCAACACATGCTACAACTAGAGGATGCGAGAGTATGCAGCGTTGAGGAAGTTGTTACGAAATTTGTTTTGGACGTAGAGGTTGTGTACGCAAAATTGTGCGTGAATGTCACAGCGGCGTTTGAAGACATTGTTTGTGTCCAGAAGCAAGCGGGCATCGAAAAACTTGAAGGGGCCCTTAACACTTTGTTGGTCTTGTTAAGAACACATATTGCCACATTAGAAAAACTTCCCCACACCATCTTTCAAACCTTGTGGAATGAGGGAGTACCTGAATTGTCATCTCAAGCTTTAAATCTTTTGGAGACTAGATATTCTGAAAGGGCATATGTAGAATACTTGGACAAGGAGAATGTGCCAAGGCGTAGACAAGCCAAATTTCTATGTTCCAAAGCCGTTGCTTGTTTTGATGTTTCACCACAGTTGGACTACATGGTGTGCGAATGTATGGATAACACGATACAGCTATGGTCGCTCCATACTGGCAAGCAGTTATGGAAACGAGATGTCATGGTAGCCAAAAATTACTTCAGCATGTTTGTAACCGGTGGTGATGTTGTCTACGAACCATTTAGGGCAACGAAAATCTTTAACTACGCCGTACCCTATCCTCTTTTGGAGAAGAGGGATGTGTCATTTCACTTTAAGTTATTACACCATAGGTCATTATACCGCTCAGTAGTGTTTCATCCCACACAGGACCTTGTGTTACCAGGAATCCTCAGCCATGCCTATTCGTTTCACGGAGAACTGAGACCACTTTTTCCTTCGAGCAAGTGCCGTTTCTCAGTTTGTTCGATATCTGCAGACAAGACCAAGATGCTAACTGATTGCACCAGTGATGCCAAATCAATTATCATGTGGAGTCTGATAGATGGCTCAGAGATAAATCGTTTTGCATGGAATGACGATATCCTATCATTTGCTTTGTCTCGTGATGGCAGACTGCTTGCAGTTTCCGACTTTCGTGGTTCGATTGGTTTGTGTGACGTAATGGATGATTATAGAACTCTAGCACAGACAACTATTCCAAAAGTGTGCGGACTGATGAAGTTCTCCCCTGACTGTCAATGTCTGTATTGCTTCAACGATGTTTGGTGTAATCCGTTTAATCTCTTTCGTTTACATGTCAACGTGGGAGATGACGGGGGCTTTTCTTTGGATATTTTGCATAATGAAGGATCTTATCACCCCTGGGATTTTGAATCCGGTAGTGAGCCCGGATTTTTATTAGGAGATCCTTGTTACTTGCCCCCGATAACAGATGACGACCACTTCCCGAGTTCCAGGCTTGTCTTTGTCCTGAATAAACAATCTGTATTGAGAGTTTCTTCTGATAAAAGAGTAATAGAGATGCTGCAGCTTGATGAACTAACCAAAGACAGTGCCGGAGATTCAAAGGCTATTGTTTGGAATGTTGTATTCTCACTGAATGGTGACAGGCTGTTTGTTATCACATATCCAAAACGAGAACTTATGGTTTGGGACATATCAAGTGGAATGTTCAAACCTGGGAAAATATTACTCAAGGGGGCCGACGTTAATTATAAGTTTGTACCCGTAAGGGAAGGTCTTCTTTTGCAAACCACTCGTGACACCCTTGAGCTTTGGGATTTTGAGTTGCGGGAGTGCATCCGAAGCTGGAATGGATTAGAGTACATCCGTGGAGTAATCTCCATATCAGAAGACCAAGTGGCCTGTAGAGTAGGGAAGCAGCTCAGCCCTCTGGATACAGCCATGACAGAAGAAGTGAACAAAGTCATCATTGTGGATACAGCCAAGAAAGGCTTTGTGTCAACAATTACTATTCATGGGCAGTTTGTTGGTTGTAACAGTAAATGTCACGTGATAACCACTGATGGTCAGGAATTGCAGATGCAATGTGGCGGTGTTGTTTTCTGGAAGATAGCCGTACCTGTTAAGACCTCTTATTTGTATTCCGTCAGTTCATTTTCTCCAACCGAGCAGTATTGCATACTTGCAGGTCCCAACGCCCTTTACGTCCTTGATGTAACTTTAGGACGAACAATCCGCACATTACAACCAGGCATTCATGAGGGCTCTCTTCCTACAACCGATAAGTGGAAGTTTGTTAGTGACGAGGAGTGTGTCGCCCTCTTCCGCATCGGTTATTCTCCAACTTACTTTCTTCAGCTGTTTAATGTCAAGTCAGGTGACCTGCTAAGTGAAATTGGTTTGGAAGGCCCTGTGGACAGTTTAGCAGCTTTTCCTCGTGAGCGTCTTGTCGCCATTGGTTTTGGGTATTTCAATATGAATTTCAAAGTTCTTCAGGTGAAGTTGCCGGGAGATCAACACAGCAGGCGGAGCAAAAGGATCAAACCTAAAGAGTGA

Transcript

FUN_029464-T1

Protein

FUN_029464-T1

MADSSSSQYDQESKKEARSKLIEHAVRCLTKERSTSVCVKRDDVARVWKQLHESGKAGEYFTEKERQEIEEEIVYWEHFHDSQVQTRRPSDLRVCYLCGENPIDDLEVLEVLVTNGVLCQNVWAVEKDSKKLEKGWNAIKNPTLRKVKLFDGGFLTFLKDFPGQFDIIYFDACGCLPAAKENTLKVIGYVFLYNKLTSPGALITNFSFPPQDTRQENPAISQDVYLDKEKEMINVLVKEYMNYRLCNVLGKENNAEYLSERTDDHEDNYGDYVSFQVIDSAYLFIPAQRILWSKRKLLLGQIFNFSSEVESTTEGTNERSTKTTRNQELMASLEELNEKYDRFLHQRKMAGIDLEKSNSYCEAFVAEIFPDLKSLPREGNSSVPSTPLPFSSPHYIIQFCKDLSKCLVPLLKADVDERILSCCDMATPEQIICHLADLLYGQMAYPSFPVRDKLFRLRYTYEQRQMFGDVFVFDKCRYLYDQFLSVDCAGFAERKQQILFTVVVDGLCKHLGGICSEDLFKFCNVGQGYAVITEGGAIFPNSVGRIPERQKIEDILFKKVKKIQEEEISYSFAATESRWVVTSADKLRYDAIFKQADKDGDGLVSGEDVKSTFMASVLDEQILAHIWELCDITNQGQLNSEEFALAMYLIDQKDMGVDPPQMLSPEMVPPSKRASSAGGPVAAGEATSSLPRCISMDSDRSGEDRQDDELPPQDTRTQQEVDQCVGLHTDFVQAKHQGSEEDSDKTIGMEKATPLSLEEVALDQGTGVIGAATSADDEEVLGKEEDSDEMIGMERATPLFSEEVALDQGAGMIGTATVADDEEVLGKKEDTDQMARIATVREKVHDDIPEDLTSCTLDYGDGSPFKKTNGAKLSRLLIDGGTMVLRKIFDRYHPPANVQANLNANYGTLNNLLRRKVLKQPQWDLLFPPDGATPDSNTFDITLLFLLLTSICGLSPPPSGWHTKPSASDTSVEANLSRIKFFRNELYGHVTTTGIDKATFSTLWQEISAVLVALGLPQAEIDRLKAEHCGEEDFLDVLFKWADSEEDIKSQLRDIRQYQAKIKEIVEDVLNLQSVALTPETIDENRQTQLGDRGTVRDNKVDTKLQEDVEVQKEKNRENEILNKLAKIETLKDVRNHADRYVDGTRLSFFSAVDSWLNDRSCPNRVMVISGSAGMGKSVISAVICEKMQHAGRLAGSHFCQHDRARHINPKVMLQSLASQLCDILPEYKKALVETSRNLSVEINDMEVKDLFKVLFEEPLASLNDSSLAYLIVIDGLDESEFKGRNEFLDVIANYFQSLPSWIRFLVTTRPEINIAENLKDLHPLQLDPNVEENVKDIYLFFDKQIGHLLQSEHQEIVLRALVQKSEGVMLYAHYLADFIKKEMPVLTPELLDSILPSGISPVYDSYFKRLETELCTELSVMEDPFLTFLSAVAASREPLPLGFVSKLLLPGKSTPAAHRKEDAAISCVSALLPVQDGCIHVFHKSVKHWLIDKSNYGQHHFSVDEKEGHEVLSKLCIDELHELKRKGVEGAQFSDITKYALRHGVQHMLQLEDARVCSVEEVVTKFVLDVEVVYAKLCVNVTAAFEDIVCVQKQAGIEKLEGALNTLLVLLRTHIATLEKLPHTIFQTLWNEGVPELSSQALNLLETRYSERAYVEYLDKENVPRRRQAKFLCSKAVACFDVSPQLDYMVCECMDNTIQLWSLHTGKQLWKRDVMVAKNYFSMFVTGGDVVYEPFRATKIFNYAVPYPLLEKRDVSFHFKLLHHRSLYRSVVFHPTQDLVLPGILSHAYSFHGELRPLFPSSKCRFSVCSISADKTKMLTDCTSDAKSIIMWSLIDGSEINRFAWNDDILSFALSRDGRLLAVSDFRGSIGLCDVMDDYRTLAQTTIPKVCGLMKFSPDCQCLYCFNDVWCNPFNLFRLHVNVGDDGGFSLDILHNEGSYHPWDFESGSEPGFLLGDPCYLPPITDDDHFPSSRLVFVLNKQSVLRVSSDKRVIEMLQLDELTKDSAGDSKAIVWNVVFSLNGDRLFVITYPKRELMVWDISSGMFKPGKILLKGADVNYKFVPVREGLLLQTTRDTLELWDFELRECIRSWNGLEYIRGVISISEDQVACRVGKQLSPLDTAMTEEVNKVIIVDTAKKGFVSTITIHGQFVGCNSKCHVITTDGQELQMQCGGVVFWKIAVPVKTSYLYSVSSFSPTEQYCILAGPNALYVLDVTLGRTIRTLQPGIHEGSLPTTDKWKFVSDEECVALFRIGYSPTYFLQLFNVKSGDLLSEIGLEGPVDSLAAFPRERLVAIGFGYFNMNFKVLQVKLPGDQHSRRSKRIKPKE

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q60902	Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1 PE=1 SV=3
Q9UBC2	Epidermal growth factor receptor substrate 15-like 1 OS=Homo sapiens OX=9606 GN=EPS15L1 PE=1 SV=1
P42566	Epidermal growth factor receptor substrate 15 OS=Homo sapiens OX=9606 GN=EPS15 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000186 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18738 all species →	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan
PF05729 all species →	NACHT	NACHT domain	Domain	Interproscan
PF12763 all species →	EF-hand_4	Cytoskeletal-regulatory complex EF hand	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000261 all species →	Domain	EH domain	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR011047 all species →	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR007111 all species →	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR041249 all species →	Domain	DZIP3-like HEPN domain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11216 all species →	EH DOMAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan
GO:0016197 all species →	Biological Process	endosomal transport	Interproscan
GO:0030132 all species →	Cellular Component	clathrin coat of coated pit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_029464-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.