Detailed information of FUN_029536-T1 in Acropora pulchra

Genomic Location: ptg000023l:3089913...3091271
NR annotation: XP_015780011.1, PREDICTED: uncharacterized WD repeat-containing protein alr3466-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001705 (this species only)
Ubiquitin familyE3|E3 adaptor Cullin RING|SOCS · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →
WD40WD domain, G-beta repeatRepeatInterproscan
PF07525
all species →
SOCS_boxSOCS boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR001496
all species →
DomainSOCS box domainInterproscan
IPR036036
all species →
Homologous_superfamilySOCS box-like domain superfamilyInterproscan
IPR051983
all species →
FamilyWD repeat and SOCS box domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15622
all species →
WD40 REPEAT PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0035556
all species →
Biological Processintracellular signal transductionInterproscan
GO:0000209
all species →
Biological Processprotein polyubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_029536-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP