Detailed information of FUN_030181-T1 in Siderastrea siderea

Genomic Location: contig_31:4737336...4744125
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17833
all species →		UPF0113_NUPF0113 Pre-PUA domainDomainInterproscan
PF03657
all species →		UPF0113UPF0113 PUA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040598
all species →		Domain60S ribosome subunit biogenesis protein NIP7, pre-PUA domainInterproscan
IPR036974
all species →		Homologous_superfamilyPUA domain superfamilyInterproscan
IPR005155
all species →		DomainUPF0113, PUA domainInterproscan
IPR002478
all species →		DomainPUA domainInterproscan
IPR015947
all species →		Homologous_superfamilyPUA-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23415
all species →		CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0030687
all species →		Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0042273
all species →		Biological Processribosomal large subunit biogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_030181-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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