Gene detail

Detailed information of FUN_030340-T1 in Dendrogyra cylindrus

Genomic Location: contig_79:428343...491423
NR annotation: XP_020622999.1, uncharacterized protein LOC110060552 isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P98160	Basement membrane-specific heparan sulfate proteoglycan core protein OS=Homo sapiens OX=9606 GN=HSPG2 PE=1 SV=4
A2AJ76	Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1
Q05793	Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07534	TLD	TLD	Domain	Interproscan
PF01391	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006571	Domain	TLDc domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR008160	Repeat	Collagen triple helix repeat	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR051129	Family	Calcium/calmodulin-dependent serine/threonine kinase	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47633	IMMUNOGLOBULIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan