Detailed information of FUN_030424-T1 in Acropora pulchra

Genomic Location: ptg000023l:10836664...10838923
NR annotation: XP_049594876.1, uncharacterized protein LOC125979990 [Syngnathus scovelli]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P84227Histone H3.2 OS=Bos taurus OX=9913 PE=1 SV=2
P84230Histone H3.2 OS=Cairina moschata OX=8855 PE=2 SV=2
P84229Histone H3.2 OS=Gallus gallus OX=9031 GN=H3-I PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0117790 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00125
all species →		HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF16211
all species →		Histone_H2A_CC-terminus of histone H2AFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007125
all species →		DomainHistone H2A/H2B/H3Interproscan
IPR000164
all species →		FamilyHistone H3/CENP-AInterproscan
IPR002119
all species →		FamilyHistone H2AInterproscan
IPR009072
all species →		Homologous_superfamilyHistone-foldInterproscan
IPR032454
all species →		DomainHistone H2A, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11426
all species →		HISTONE H3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0000786
all species →		Cellular ComponentnucleosomeInterproscan
GO:0030527
all species →		Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982
all species →		Molecular Functionprotein heterodimerization activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_030424-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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