Gene detail

Detailed information of FUN_030652-T1 in Dendrogyra cylindrus

Genomic Location: contig_81:762318...762620
NR annotation: KAJ8013984.1, hypothetical protein DPEC_G00035520 [Dallia pectoralis]
Species Dendrogyra cylindrus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4FE47	Putative E3 ubiquitin-protein ligase XBAT35 OS=Arabidopsis thaliana OX=3702 GN=XBAT35 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0013676 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13920 all species →	zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46858 all species →	OS05G0521000 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007049 all species →	Biological Process	cell cycle	Interproscan
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_030652-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.