Gene detail

Detailed information of FUN_030771-T1 in Colpophyllia natans

Genomic Location: contig_86:895944...902072
NR annotation: PFX14876.1, hypothetical protein AWC38_SpisGene20941 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_030771-T1

atggtttttaaacGAAAAATCTCCGCAGAACAGAAGGCTTTTGTTAAATTTCTTCGCCAAGAAGGTGATGTACCTGTAAAGGAAATTGTACATCAGTGTGGTATATCTCGGGCCACAATTTATCGCTGGTTAAAGAGTACAAATCAAAGCATTCAGAACAGCAAGAAGCGTGGCAGGCCTCGCTTAGTAAGTGAGCGCGAAGAGAGGACGATACGGCGCACTATCACAAGACTTCGCAAGCAAGAGGGAAATTTTTTGTGCCAGAAAATAAGAGCGGAGTCAGGATTGCATCATGTGTCACTGTGGACAGTAAATAGGACATTGAAGCGAATGGGTTATGCCTTCTTGGAAGCGCGAAGAAAAGGAATACTATTGGAAAAAGATTTCAAGGAACGAGTACAGTTTGCGCGCAaagtgaaaagaaattattcgGAAGACTTTTTCAAGAAAGATATTTGCTTCTACCTTGATGGGGTAAGTTTTTATCATAAAACTAATCCAATGGATGATGCCAGAGCCCCTCAAGGGAAAGTATGgcggaaaagaaaagaaggacTGTCAGTTACTGCCAAGGGATCACATGTCAGGGTTTTCTTTGAATTGTGGGATATCTGTGGGGTCTGGGAACGAAAGGAGAGGCCATTTTGGAAGAGTGAAAATGGATCTTTCCGTAGCGATGTTTTTGAGAAGAATACGGTTGAAAGAAGCCAGAATGATGTGGAGTTAGTAAAAAGAAGAGTAATTGAGACTGACATCGTAAGAAAAAGGAAACTTCTGAAAAGACGAAGGTTTCCAACCTCCATATCAGAAGCCAGTTCCGAAGAATATGCAGTTCCTGTTGCAAAAAGAACTTGCCAAAGGCGTACAAGGGAGACCATCGATGCCTGTAATGAAATCCATGGTGGTACCAGGGAGAATAAAAGTCCAATACTGGATGCTTTGCGGTTGACTTTAGTTAAGGAAGCCACACCGTTTCAGTTGGGAAAATACTTTTCCTTATCTAAGAAAGTAATGAAGAAAGTTTTACCTAAGGTAGTGAAAGAAAGTATTCCAACTTTTGAGAATAGCTTTGACAATAAAATTAGAAGCCTAAGAGTATTGTACAGCAAGGGGTTGTTGAGTAAGGAGAAATATAAAAGTATTAGGCTCAATCTTTCCATGAATACTCGCAAAAGTGGCAAGAAACTGGAAAGCTTAAAGTTCATGTCAAGTGTTCGCTTGCCGAAGATCTTGCCCTATGAGAAATTGATAACTTTTGTCAAAATCATTTATGTTGGAAATGTTAATGATTTCAAAGATTTTTGCTATGATTTAGATGCAGATGAAGTTGTGGAAGGGTCATATAGAGAGCTACAGCCATTTCTGTTGCAGCTTGCTGATATGTATGTTTGCTTAGATAAGACTAGTCCATCCCTGTGTCATTTTGGATCTGAACCGTATCACTTAAGAGTAGCTCTAGGTGCTGATGGGGCCCCCTTCGGCAAAGACGATGAAGCCACTTCTTGGCTTGTATCATTCCTCAATGTAGGTCAGCAAATTGCAAGTGAAACTGACAACTTTATTCTTGCAGGAGCAAATTGTAGTGAATCTCACCTCTCGATGCGCTATGCACGAAAGCTTGTTTCAGATGTGGGTGACATAGAGGACTCCGTAACACCGACAGTTTGGACAATCGGTCATGCCATCCCTTATCACACAGACCTCCTGTATAGGAAACTTGGCTTAGGGTTAGGCATTAACACTATGCAAGGGAGGGAGGCTAAACACGTGCACATCAGCCAGTATGCAAAGCATGCAACCTTGTCAACAAGGTGGAACCTTGTTTTCAGACATGATTTCATTACAACTGTTTGGTTAAGGCAATATGACCCTGCAAGTTTTCACTACCACAAGAGCACAGATGTGTACGTTCCTAAAAAGATTGAGCAACCAAATGTTTGCTACTGTGGCTTAGACAAGGAATGCAGTGCTGAAAAATGTTCACTGTGTTCATCTGAGATTTACAAGAGTGTAGAAAGGAGTACTGAAACAGGGGCTTTAGACCCATATATTTGCAATCTTCTTAGTGTCACAAGCTGA

Transcript

FUN_030771-T1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02796	HTH_7	Helix-turn-helix domain of resolvase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006120	Domain	Resolvase, HTH domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0000150	Molecular Function	DNA strand exchange activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07497	K07497; putative transposase	-	Replication and repair	-	deepkoala