Detailed information of FUN_031068-T2 in Acropora pulchra

Genomic Location: ptg000023l:16917390...16939571
NR annotation: XP_044174721.1, LOW QUALITY PROTEIN: alpha-actinin-1-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
L7UZ85Alpha-actinin OS=Dermatophagoides farinae OX=6954 PE=1 SV=1
P05094Alpha-actinin-1 OS=Gallus gallus OX=9031 GN=ACTN1 PE=1 SV=3
Q3B7N2Alpha-actinin-1 OS=Bos taurus OX=9913 GN=ACTN1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002750 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00435
all species →		SpectrinSpectrin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036872
all species →		Homologous_superfamilyCH domain superfamilyInterproscan
IPR018159
all species →		RepeatSpectrin/alpha-actininInterproscan
IPR002017
all species →		RepeatSpectrin repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11915
all species →		SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0030018
all species →		Cellular ComponentZ discInterproscan
GO:0030036
all species →		Biological Processactin cytoskeleton organizationInterproscan
GO:0030054
all species →		Cellular Componentcell junctionInterproscan
GO:0030864
all species →		Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995
all species →		Cellular Componentcell projectionInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan
GO:0055001
all species →		Biological Processmuscle cell developmentInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_031068-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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