Detailed information of FUN_031242-T2 in Acropora pulchra

Genomic Location: ptg000023l:18473025...18484251
NR annotation: XP_029185592.2, DNA-dependent metalloprotease SPRTN-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A0G2L7I0DNA-dependent metalloprotease SPRTN OS=Danio rerio OX=7955 GN=sprtn PE=3 SV=1
D3ZVU1DNA-dependent metalloprotease SPRTN OS=Rattus norvegicus OX=10116 GN=Sprtn PE=3 SV=1
Q9H040DNA-dependent metalloprotease SPRTN OS=Homo sapiens OX=9606 GN=SPRTN PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005080 (this species only)

 Pfam domain
No Pfam domain signature was detected for FUN_031242-T2. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR006642
all species →		DomainRad18, zinc finger UBZ4-typeInterproscan
IPR044245
all species →		FamilySprT-like domain-containing protein SpartanInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21220
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0003697
all species →		Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0004222
all species →		Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006974
all species →		Biological ProcessDNA damage responseInterproscan
GO:0031593
all species →		Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_031242-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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