Gene detail

Detailed information of FUN_031362-T1 in Acropora pulchra

Genomic Location: ptg000023l:20099515...20112333
NR annotation: XP_044162702.1, NLR family CARD domain-containing protein 3-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_031362-T1

ATGAAAGAGAAAACCCAGGACCAACTTGGAGAAATCAAAGAGATGATAAAGCAGCAGCAGCTACAGGAAAGGAGGGCTAAAGAATCTCTAAAAGATAAGGAAGTTTCAGATCCTTTTGACCTTGTAAAATACATCAGCATTATTCGCCAGCTTTACGAAGACCGTGAAGGATGGTTGGCGCCTTTCCCGTGGTGTGAAGAGTTTCGATTCAATCTCGATAACATTTTTACCAGACTCAAGTTTGTCAGCAGAAGAAAAGAGCGAGGAATGAGAACTGATGTCATTGTTGACATGTTTCAAATATTTCAACCGCATCAAGAATGTTCACAGCCGCGGAGGGTCTTGATTGAAGGGCAGCCAGGCATGGGAAAGACAACGTACTGTCACAAGATTGCTTACGACTGGGCAAAGAAACGAAAAGGTGGCGAGTCATTTCCTGATGTTGCACTTGTGCTACTATTAAAATGCCAGGACATCAACTGTGGCCTATGGGAGGCAATTGATGACCAGCTTTTACCGAGAGAAGTGAAGGAAGAAGACAAAGAAAGATTTTTCAAGTTCATTCGGGACCACCAGTCAAAGGTTTTGCTGGTGCTTGACGGATTAGATGAGTTACCCAGGGGCCAATTGTCGATCTATACAGACATCATTCAAGGAAGAGTCCTTCCAGAGTCTTACATATTGGTTACTGCACGACACGAAGTTGGAGTGAAGGTACGAGAATGCTGCCACACCCTGTTAGAGGTAGAAGGATTTACCTTGACTGATGTCAAAGAGTTCATTCTGAAGTATTTCGAAGAACAGCATTTGGCAGAAAAGTTGTTTGACAAGGTGAAGTCTGACAGAACCCTACGAGACCTTACAAGAAATCCGTTAAACACAGCTCTTCTATGCCTCCTCTGCGAAGAATTGGAAGGAAAATTTCCCGAAAGTAGAACTCTGCTTTACCTTGAAATAGTTGAGTGCATGCTGAGAAGGTACAGGCGGAAGATGAAGTCACCAGAAACAAATGAAGACCTTGTAGAATTATACAAAGTTGAGCTGAAGCAACTTGGCTGTGTCGCCATAGAGGGTTTGCGCAACGATAGCATGTATTTTGACGAGAGTGCATTTGGGGGTTTCTCAAGCGAGGTAAAATCTGGCCTCGGATTTTTGTCAGTGCAGCCTGGACGAAGCAAACGAAGACCAAGTCGAAGCTATGGCTTCCTGTACAAAAGCTTTCAAGAATTCTTCGCAGCACTTTGTCACAGTTGTCAGCTTCTTGATGGTGAAATCTCTGTTGATAGCTTCCTTGCTGACCGCAGATACTTCCAGGTGCTGATGTTCACGAGTGGTATGTTGGCTCAAAAGTGCGAAGCAGCAGCCAAGGCGTTTATCGCTGGCATAGCTACCCAAGTCAACCTGGAGGGTAGCCTTTTACCCGTTGCATTGGCTTGTATCAATGAATGCAAGAGAGAGGAGAATTCTTTTCGCAAAGAAATGGCACAGTTTTTTGGTTCACATCTTAAACTTCAGAGGGCCGAGTGCCAAGGATTGACCAACGAACTTGTTGCTGTGTGTATTGAAACCTTGAAAACGAATTCCACAGTTACAGGGCTGGTTCTCCTTGATTGTAAGATTGATGATGCAAATGCTGCTGAACTGGCTGGGCAATTGAAAGAAAATTCAACGCTGACATCGCTGGACTTGTCTGAGAATGAAATTGGCGAAGTTGGCGCTGATGCACTGTCTAAAGGATTGACAGAAAATTCAACGCTGACATCGCTGAACTTGTCTGATAATTATATTGGCGAAGTTGGCGCTGATGCACTGGCTAAAGGATTGAAAGAAAATAAAATGCTGACATCGCTGAACTTGTCTGATAATTGTATTGGCGAAGGCTGCGCTGATGCACTGGCTGAAGGATTGAAAGAAAATTCAACACTCACATCGCTGGACTTGTCGGGTAATAATATTGGTGACGTTGGCGCTGATGGACTGGCCAAAGGATTGAAAAAAAATTCAACTCTCATATCGCTGGGCTTGTCTGCTAATAATATTGGCGAAGTTGGCGCTGATGCACTGGCCAAAGGATTGAAAGAAAATTCAACGTTGACATCGCTGGACTTGTCTCAAAATGAAGTTGGCGCTGATGCACTGACTAAAGGATTGATAGAAAATTCAATGCTGACATCGCTGAACTTGTGTTTTAATAAAATCGGCAATGACGGTGCTGATGCACTGGCTAAAGGATTGAAAGAAAATTCACCGCTGAGATCGCTGGACTTGTCTTATAATGAAATTGGCGAAGTTGGCGCTGATGCACTGGCTAAAGGATTGAAAGAAAATTCAATGCTGACATCGCTGAACTTGTGTTTTAATGAAGTTAGCAATGACGGTGCTGATGCACTGGCTAAAGGATTGAAAGAAAATTCAACACTCACATCGCTGGACTTGTCTGCTAATAATATTGGCGACGTTGGCGCTGATGCACTGGCCAAAGGATTGAAAAAAAATTTAACGCTGACATCGCTGAACTTGTCTGATAATTGTATTGGCGAAGTTGGCGCTGATGCACTGGCCAAAGGATTGAAAGAAAATTCAACGTTGACATCGCTGGACTTGTCTCATAATGAAGTTGGCCCTGAATGCACTGGCTAA

Transcript

FUN_031362-T1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05729	NACHT	NACHT domain	Domain	Interproscan
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007111	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR027038	Family	Ran GTPase-activating protein	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24113	RAN GTPASE-ACTIVATING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22614	NLRC3, NOD3; NLR family CARD domain-containing protein 3	-	Pattern recognition receptors	ko04054	deepkoala