Gene detail

Detailed information of FUN_031450-T1 in Acropora pulchra

Genomic Location: ptg000023l:21578908...21585334
NR annotation: CAH3024119.1, unnamed protein product [Porites evermanni]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_031450-T1

ATGGCTGCTCAGTTTTACGTAGTAGAATTTCCGTCAGAAGATGAGAAATGCAGAGGGCCATATCTTGTGCCAGCAAGCAAAGTTGAAGAGGAAGACGGAACTACTCAAGTTCTTTGGAGTGTTGTTGATGAACTAAAAGGTAGCATTATGGAAATTTACTATGAAGCAGCATGCCTCAAGCAAGGTACGAAAAAGGAATGTAGTGATTTCCTTGACCTTCTCAAGAAAAAAAGAGAGCAGGCGGATATTAGCAACAAAGGGGGAGTAAGGAGCCGCAAGAAACCAGCAAAACTCGACGATTATGATTTTGAAGATCTCGCCGAGTGCTCAACGTCTGGAAAACCACCAACCAAGAAGGCAAAGAAAGCAACAATAGAAACCCCATTCGACATCTGTATTGATGAACTTGATGAGGACTCGGAACCTTTTGATCCTGAAGTGGAAACAAATGCAGTCATGAAGAACTGGACCAAGAAGGCAATCTCAAAAAGCGAGAAGCCAAAGACCAATGGTTTTTCCCGCCGAAACTCAAAAAGCAGTAAGAAGCCACAGAGGGAAAATTCTCGAAAGGAGCAAAGATCACAGCGGGAAGAGAAGATCAACTCATCGCAAAAAAAAGCGAGATGTGAAACTGTCGAAGCCCAGTCGAACGACATTGAAAAATTGATGCAGAAAGGGATGAAGCTACTTCTACACTTGGACAACAGTGATGAACCAGCAGATATATCAATTTCTGTATCGCCAGAAACAACGTTCGAGGGATTGAAACGCAAAATTTCTCAGACCACCAGAATATCGCCCGGCAATCAGCTCCTTATTTTGAAGGGCAAAGAGTGGTCAATGGAAGAGCAGGAAACGATTTGCCACTGCTGGACAACAGATGACTTGGTAGCCGTCTTTGAAAGAAAATATTTTTCAAGCGATACAAGTCCTGAGTTCCACGCTAGCTCAACAGATATGAGTTCAGTTAACCTGGCTGATGATGTCGAGCAAGTAGGCTCTGGAGACAATGACACTGGCCATTATTCACCTAAAATACAAGAGGAGACCAATCATGAAGAAATTGAAATAAAGGTCGATAACCTTCTAAAGCAGATGTCCGTAGTTTCTAGCCAACTACAACAACTGAGTGATACTGTGGAAAAATTTGTGAAGTGTAAATCTTATCAAAAAAAATTCTATAAAGCCCTGGATGATAACGACGTTAGCCTTGAGAATGTTGCAACCGGACGGATAAAAGCAGGAGAATATCATGCCACTCCAGCCACTCCACCAGCCTCAACGCCAACACCATTAGTTTCTTCAACGCCTCTGGCCCAGAAAAATGCAAAAGTTATTCCCATCCAGAAGAGCACGGATAAAAGAGTTGACGATTCCAATGATACTATACTGGTTGGCTCCGCAAGCAGGGGAATATATCTCTCCAAAAAGAAAGTTGATCTTGTTTCCAGGAGCAGCCCCAAACTCTTTGCCCTTAAATTATTTGAATTAGTGTTTCGGCGTGAAGAGGCAAAGGAAGGGAGTATTGAGGGTAAAGGAGAGAAACTTCTCCAGTTAGACCCAAACCGACTGGCTGCAATAAGAGAACACACAGAAAGAATGTTCCCCGATGAATTCAACTGGCCTGTGATTAAGAAAGCGCTCGATGAAAAGTGCAGAATGATCAATGAACTTCGTCGCTCGCAACTCCAACAAGTCAGCACAAGCCGCTTTTGTGTACAAACATCCACGTCATGGCTCTGCGTGGCTCCAGGACGGTCGAGTCTTGATGAACCAGATTTTGATTCTGGATTTCACAGAGATAAAAAGCTCTTCACTCCAGGGCCCCTTGGAGTGAGCTTTGAAACAAAACGAGCGATGCTCAGAGACCTTGGTTCACGCGACACTGAGTTCATAGGCATTGTCAAAACCATTCGTTCAAGGCTCTTGGGAATTGCTGGTGTTTCTCCTGAAGAATACACTGCCATCCTGCTTCAGGGGAGTGGAACATATGCTGTGGAGGCTGTGCTGACCACAACAACTCCTAGGGAAGGTGGAAAAGTTTTGATCATTGAGAATGGCTCTTATGGCAAGAGAATGGCCAAAATTTGTGAAGTTGCTGGAATTGAAACAGTAAGCAGACAGTTTATACTTTCAGCTTAA

Transcript

FUN_031450-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q02JF1	2-aminoethylphosphonate--pyruvate transaminase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=phnW PE=3 SV=1
Q9I434	2-aminoethylphosphonate--pyruvate transaminase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=phnW PE=1 SV=1
Q183T0	Bifunctional phosphonoacetaldehyde hydrolase/aminoethylphosphonate transaminase OS=Clostridioides difficile (strain 630) OX=272563 GN=phnXW PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002904 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240 all species →	ubiquitin	Ubiquitin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR000626 all species →	Domain	Ubiquitin-like domain	Interproscan
IPR018379 all species →	Domain	BEN domain	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42778 all species →	2-AMINOETHYLPHOSPHONATE--PYRUVATE TRANSAMINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_031450-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.