Detailed information of FUN_031565-T1 in Acropora pulchra

Genomic Location: ptg000023l:22913658...22925180
NR annotation: XP_029202495.2, sodium/calcium exchanger 1-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q01728Sodium/calcium exchanger 1 OS=Rattus norvegicus OX=10116 GN=Slc8a1 PE=1 SV=3
P23685Sodium/calcium exchanger 1 OS=Canis lupus familiaris OX=9615 GN=SLC8A1 PE=1 SV=1
P70414Sodium/calcium exchanger 1 OS=Mus musculus OX=10090 GN=Slc8a1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001922 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01699
all species →		Na_Ca_exSodium/calcium exchanger proteinFamilyInterproscan
PF16494
all species →		Na_Ca_ex_CC-terminal extension of sodium/calcium exchanger domainFamilyInterproscan
PF03160
all species →		Calx-betaCalx-beta domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004836
all species →		FamilySodium/calcium exchanger proteinInterproscan
IPR038081
all species →		Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR044880
all species →		Homologous_superfamilyNCX, central ion-binding domain superfamilyInterproscan
IPR004837
all species →		DomainSodium/calcium exchanger membrane regionInterproscan
IPR032452
all species →		DomainSodium/calcium exchanger domain, C-terminal extensionInterproscan
IPR051171
all species →		FamilyCalcium/Cation AntiporterInterproscan
IPR003644
all species →		DomainNa-Ca exchanger/integrin-beta4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11878
all species →		SODIUM/CALCIUM EXCHANGERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005432
all species →		Molecular Functioncalcium:sodium antiporter activityInterproscan
GO:0006816
all species →		Biological Processcalcium ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0015491
all species →		Molecular Functionobsolete cation:cation antiporter activityInterproscan
GO:0030001
all species →		Biological Processmetal ion transportInterproscan
GO:0030424
all species →		Cellular ComponentaxonInterproscan
GO:0035725
all species →		Biological Processsodium ion transmembrane transportInterproscan
GO:0042383
all species →		Cellular ComponentsarcolemmaInterproscan
GO:0098703
all species →		Biological Processcalcium ion import across plasma membraneInterproscan
GO:0098794
all species →		Cellular ComponentpostsynapseInterproscan
GO:0007154
all species →		Biological Processcell communicationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05849SLC8A, NCX; solute carrier family 8 (sodium/calcium exchanger)-Glycosaminoglycan binding proteinsko00536deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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