Detailed information of FUN_031648-T1 in Siderastrea siderea

Genomic Location: contig_33:2537609...2594061
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02138
all species →
BeachBeige/BEACH domainFamilyInterproscan
PF15787
all species →
DUF4704Neurobeachin/BDCP, DUF4704 alpha solenoid regionRepeatInterproscan
PF16057
all species →
DUF4800Domain of unknown function (DUF4800)FamilyInterproscan
PF20426
all species →
NBCH_WD40Neurobeachin beta propeller domainRepeatInterproscan
PF14844
all species →
PH_BEACHPH domain associated with Beige/BEACHDomainInterproscan
PF20425
all species →
NeurobeachinNeurobeachin alpha solenoid regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000409
all species →
DomainBEACH domainInterproscan
IPR031570
all species →
DomainNeurobeachin/BDCP, DUF4704Interproscan
IPR036372
all species →
Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR046851
all species →
DomainNeurobeachin, beta-propeller domainInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR023362
all species →
DomainPH-BEACH domainInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR050865
all species →
FamilyBEACH Domain-ContainingInterproscan
IPR046852
all species →
DomainNeurobeachin, alpha-solenoid regionInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13743
all species →
BEIGE/BEACH-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0008104
all species →
Biological Processprotein localizationInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0019901
all species →
Molecular Functionprotein kinase bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_031648-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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