Detailed information of FUN_031785-T1 in Dendrogyra cylindrus

Genomic Location: contig_90:881354...914436
NR annotation: XP_020600476.1, sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P0C6B8Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Svep1 PE=1 SV=1
P98105E-selectin OS=Rattus norvegicus OX=10116 GN=Sele PE=2 SV=1
Q96PZ7CUB and sushi domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CSMD1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF07699Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF02494HYRHYR domainDomainInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR003410DomainHYR domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR011641DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12916CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP