Gene detail

Detailed information of FUN_031801-T1 in Acropora pulchra

Genomic Location: ptg000023l:25612098...25623788
NR annotation: XP_015747641.1, PREDICTED: breast cancer metastasis-suppressor 1-like protein-A [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q4V8V1	Breast cancer metastasis-suppressor 1-like protein-A OS=Danio rerio OX=7955 GN=brms1la PE=2 SV=1
Q6AZT4	Breast cancer metastasis-suppressor 1-like protein OS=Xenopus laevis OX=8355 GN=brms1l PE=2 SV=1
A4II71	Breast cancer metastasis-suppressor 1-like protein OS=Xenopus tropicalis OX=8364 GN=brms1l PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08598	Sds3	Sds3-like	Family	Interproscan
PF02961	BAF	Barrier to autointegration factor	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036617	Homologous_superfamily	Barrier-to-autointegration factor, BAF superfamily	Interproscan
IPR013907	Family	Sds3-like	Interproscan
IPR004122	Family	Barrier- to-autointegration factor, BAF	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21964	BREAST CANCER METASTASIS-SUPPRESSOR 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0042826	Molecular Function	histone deacetylase binding	Interproscan
GO:0070822	Cellular Component	Sin3-type complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19196	BRMS1; breast cancer metastasis-suppressor 1 and related proteins	-	Chromosome and associated proteins	ko03036	deepkoala