Gene detail

Detailed information of FUN_031875-T1 in Acropora pulchra

Genomic Location: ptg000023l:26291213...26311848
NR annotation: XP_029203062.2, LOW QUALITY PROTEIN: neutral alpha-glucosidase AB-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_031875-T1

ATGGCGACTTTACACGCTTTGAGTGGAATAATCTCACTATTGCTGGTATGGATAATGACTCAAATAGACGCTGTTGACAAAGGCCTCTTCAAGAAATGTGAAGACAGTAGTTTTTGCCGACTTAACAGAGCCATTCAGCCTGGAGAATCACCGTATTCAGTCATCAAAGACTCAATAGTTTTTTCAGATTCCTCGATTGATGTGAATATTCTAAATACAAAAAGAAATGTGACACTTAAACTTAAAGTTCAGACTTTAAAAAAGAACTCAGTTAGGTTTTCAATAAATGAAGCAAATCCCATTAGAGAAAGATATCAAGTCAAAGATGTTTTAGTTCAGGAACCTGAAACTGTAAGTTATCAAATACTCAAGCAAGATGATGAAAGCGTTCACATTGGCTTCGGTAACAATAGTGTCGTATTAACAAACGGTCCATTCCGACTTGATTTCCTCGTCAACAAGGAAGTTGTTGTGTCTGTTAACGCTAGAGGACTCATGAACTTTGAAGAGTACAGAGAGAAAAGGAAGGTCCCTGTGAAAGTTGACGAAGGTGAAGGCCATCCTCCTGGTGAGAACGAAGAAGAAAAACCAGAAAAGGAGGCTGAGGAGGGTGAAGGTGTTGAAAGGAAGGAAGAGGTTGTAGAAGAAGAGAATTGGGAGGAGAATTTTAAAGAACACAAAGACACCAGGCCAAGAGGTCCTTGTTCTGTTGGATTGGATGTTTCATTCCCTGGATTTGAACATGTTTATGGAATTCCTGAACATGCAGACAGTTTGGCACTCAAGACAACAGTTGGTTCTGAGCCATACCGTTTGTATAACCTGGATGTGTTTGAATATGAGCTGGATTCAAGAATGGCTCTCTATGGCAGTATTCCTGTCATGCTTGCTCACAGCGTTGCACAGACGGTGGGTGTGTTCTGGATGAATGCAGCTGAAACTTGGGTGGACATAAGCTCTTCCAATGCAAGAAAGGAAGCTGAAGAGGTCCCGCAAGTTGAAACTCATTGGATATCAGAGAGTGGTATTATTGATGTGTTTGTCATGCTTGGTCCAAAACCACATGATGTGTTCCAGGAATATGCCTCGTTTACTGGAACTACTGCGTTACCACCTCTGTTTGGAATCTCCTATCATCAGAGTCGATGGAACTACAATGACGAAGAGGACGTCGAAAATGTTGACAGTAGCTTTGACGAGCATGATATTCCTTATGATGTCTTATGGCTGGATATTGAGCACACCGATGGCAAGAAATATATGACCTGGGACAAGCTCAAATTTCCCTCTCCGGAACAGATGCAGAAAAATCTGGCTGCCAAAGGTCGTAAGATGGTCACCATTATAGACCCTCACATTAAACGTGAAGGAGGCTATCACATTCACGAGGAAGCAACAAAGTTGGGATATTACGTGAAGAACAAAGATGGTGGAGAGTACGATAACTGGTGTTGGCCAGGAAGTTCGTCCTGGATCGATTTTACCAATCCAGAAATTCGCAAGTGGTGGGCTGGGAAGTTTGCCTTAAGTGAATATCCGGGCTCGACAGAAACTCTCTTTACGTGGAATGACATGAACGAGCCATCGGTTTTCCACGGCCCGGAAGTTACAATGCACAAAGATGCATTGCATTATGCGGATTGGGAGCATCGAGATATCCACAACGTGTACGGTTTTTATCAGCACATGGCCACAGTCCAGGGACTTATTGACCGCTCGGGGGGTAGCCACAGGCCTTTTGTCCTTTCAAGAGCATTTTTCGCGGGCACTCAAAGGCACGGTCCCATTTGGACGGGCGATAACATGGCGTCCTGGGATCACCTCAAGGCTTCCCTTCCCATGATCCTCTCGCTGAACCTGGTTGGTTTGCCGTTTTCAGGAGCCGACGTTGGTGGTTTCTTTAACAACCCTGATCCGGAATTGTTGGTGAGATGGTACCAGGCTGCAGCTTTCATGCCATTTTACCGCGCGCATGCCCATTTGGACACCAAGCGACGTGAACCTTGGTTGTTTGAAGCAAATTACAAGAACATCATCAGAAATGCCGTCCGCTTGAGATATACCTTGTTACCTTACTGGTACACCCTGTTCTACCACGCCTCTGACACAGGAACACCAATCGTAAGGCCCTTGTGGGTCGAGTTCCCTGAAGAGAAAAATACTTTTTCCATGGAAGACGAATTTTTACTTGGAGAGAATCTTCTTGTAAAACCAGTTACTACTCAAGGACAGAGCACCATTGATGTTTATCTGCCGGGAAAAGACGAGTACTGGTATGATCTCAGCGACTACAAGATTTACCGAGGGGAAAGCACAATTTACGTTTCAACACCATTAGAGAAGATCCCTTTGTTTCAACGAGGTGGGAGTGTCATAGCAACAAAACAGCGGGTTCGTCGTTGCAGTGCTTTGATGCACAGGGATCCCTACACCTTAACTATTGCATTGAATCCCAAGGCCCAAGCAGAAGGAGATCTCTACGTGGACGATGGCTACACGTTGGACTACAAGAGTGGAGCCTACATTTACATGAACTTTACATTTCAGGGCGGGCGACTGATGGCAAGGAAAGCAAACCCAGGTTCAAAATACAAATCTGAGTCGTGGATTGAGCGTATAGTTATTTTAGGAATAAGCAACTCTCCCAAAGGAATCCTCCTGACTGCTGATGGTGGCGAGAGCAGACGCATGGAATTCAGACACGATGCCAACACAAACACAATGACCATAAAGAAACCAGCAGTTAACATTGGCCAAGAATGGACCATATCAATGCACGCTTAG

Transcript

FUN_031875-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BHN3	Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab PE=1 SV=1
P79403	Neutral alpha-glucosidase AB OS=Sus scrofa OX=9823 GN=GANAB PE=1 SV=1
Q14697	Neutral alpha-glucosidase AB OS=Homo sapiens OX=9606 GN=GANAB PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002987 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13802 all species →	Gal_mutarotas_2	Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain	Domain	Interproscan
PF21365 all species →	Glyco_hydro_31_3rd	Glycosyl hydrolase family 31 C-terminal domain	Domain	Interproscan
PF01055 all species →	Glyco_hydro_31_2nd	Glycosyl hydrolases family 31 TIM-barrel domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025887 all species →	Domain	Glycoside hydrolase family 31, N-terminal domain	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR013780 all species →	Homologous_superfamily	Glycosyl hydrolase, all-beta	Interproscan
IPR048395 all species →	Domain	Glycosyl hydrolase family 31, C-terminal domain	Interproscan
IPR000322 all species →	Domain	Glycoside hydrolase family 31, TIM barrel domain	Interproscan
IPR011013 all species →	Homologous_superfamily	Galactose mutarotase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22762 all species →	ALPHA-GLUCOSIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004553 all species →	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0006491 all species →	Biological Process	N-glycan processing	Interproscan
GO:0090599 all species →	Molecular Function	alpha-glucosidase activity	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0030246 all species →	Molecular Function	carbohydrate binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05546	GANAB; mannosyl-oligosaccharide alpha-1,3-glucosidase	EC:3.2.1.207	Protein processing in endoplasmic reticulum	ko04141	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.