Detailed information of FUN_031880-T1 in Acropora pulchra

Genomic Location: ptg000023l:26421307...26422197
NR annotation: XP_029189896.2, LOW QUALITY PROTEIN: sodium channel protein 60E-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UQD0Sodium channel protein type 8 subunit alpha OS=Homo sapiens OX=9606 GN=SCN8A PE=1 SV=1
P04775Sodium channel protein type 2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Scn2a PE=1 SV=1
B1AWN6Sodium channel protein type 2 subunit alpha OS=Mus musculus OX=10090 GN=Scn2a PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000452 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520
all species →		Ion_transIon transport proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005821
all species →		DomainIon transport domainInterproscan
IPR043203
all species →		FamilyVoltage-gated cation channel calcium and sodiumInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10037
all species →		VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan
GO:0001518
all species →		Cellular Componentvoltage-gated sodium channel complexInterproscan
GO:0005248
all species →		Molecular Functionvoltage-gated sodium channel activityInterproscan
GO:0005261
all species →		Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0019228
all species →		Biological Processneuronal action potentialInterproscan
GO:0035725
all species →		Biological Processsodium ion transmembrane transportInterproscan
GO:0086010
all species →		Biological Processmembrane depolarization during action potentialInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_031880-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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