Detailed information of FUN_031918-T1 in Acropora pulchra

Genomic Location: ptg000023l:26737451...26738743
NR annotation: XP_044169549.1, retinoid isomerohydrolase-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9I993Beta,beta-carotene 15,15'-dioxygenase OS=Gallus gallus OX=9031 GN=BCO1 PE=1 SV=1
A9C3R8Retinal Mueller cells isomerohydrolase OS=Danio rerio OX=7955 GN=rpe65c PE=1 SV=1
A9C3R9All-trans-retinyl ester 13-cis isomerohydrolase OS=Danio rerio OX=7955 GN=rpe65b PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001128 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03055
all species →		RPE65Retinal pigment epithelial membrane proteinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004294
all species →		FamilyCarotenoid oxygenaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10543
all species →		BETA-CAROTENE DIOXYGENASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003834
all species →		Molecular Functionbeta-carotene 15,15'-dioxygenase activityInterproscan
GO:0004744
all species →		Molecular Functionobsolete retinal isomerase activityInterproscan
GO:0016702
all species →		Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan
GO:0042574
all species →		Biological Processretinal metabolic processInterproscan
GO:0050251
all species →		Molecular Functionretinol isomerase activityInterproscan
GO:0052885
all species →		Molecular Functionall-trans-retinyl-ester hydrolase, 11-cis retinol forming activityInterproscan
GO:1901827
all species →		Biological Processzeaxanthin biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_031918-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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