Detailed information of FUN_031919-T1 in Acropora pulchra

Genomic Location: ptg000023l:26743400...26747450
NR annotation: XP_044169531.1, all-trans-retinyl ester 13-cis isomerohydrolase-like isoform X1 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A9C3R9All-trans-retinyl ester 13-cis isomerohydrolase OS=Danio rerio OX=7955 GN=rpe65b PE=1 SV=1
A9C3R8Retinal Mueller cells isomerohydrolase OS=Danio rerio OX=7955 GN=rpe65c PE=1 SV=1
Q9YGX2Retinoid isomerohydrolase OS=Gallus gallus OX=9031 GN=RPE65 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001114 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03055
all species →
RPE65Retinal pigment epithelial membrane proteinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011047
all species →
Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR004294
all species →
FamilyCarotenoid oxygenaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10543
all species →
BETA-CAROTENE DIOXYGENASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016702
all species →
Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan
GO:0003834
all species →
Molecular Functionbeta-carotene 15,15'-dioxygenase activityInterproscan
GO:0004744
all species →
Molecular Functionobsolete retinal isomerase activityInterproscan
GO:0010436
all species →
Molecular Functioncarotenoid dioxygenase activityInterproscan
GO:0016121
all species →
Biological Processcarotene catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_031919-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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