Genomic Location: contig_100:339417...344208
NR annotation: XP_020618832.1, uncharacterized protein LOC110056659 [Orbicella faveolata]
| CDS | ||||
| FUN_031970-T1 | ||||
| Transcript |
| FUN_031970-T1 |
| Protein |
| FUN_031970-T1 |
| Uniprot term | Description |
|---|---|
| A4IGL7 | Peroxidasin OS=Xenopus tropicalis OX=8364 GN=pxdn PE=2 SV=1 |
| Q96RW7 | Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2 |
| D3YXG0 | Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF01410 | COLFI | Fibrillar collagen C-terminal domain | Family | Interproscan |
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| PF07679 | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR000885 | Domain | Fibrillar collagen, C-terminal | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR013098 | Domain | Immunoglobulin I-set | Interproscan |
| IPR002181 | Domain | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | Interproscan |
| IPR036056 | Homologous_superfamily | Fibrinogen-like, C-terminal | Interproscan |
| IPR051170 | Family | Neural and epithelial cell adhesion domain-containing protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12231 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005201 | Molecular Function | extracellular matrix structural constituent | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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