Gene detail

Detailed information of FUN_032166-T1 in Acropora pulchra

Genomic Location: ptg000023l:29360015...29376974
NR annotation: XP_029201955.2, mitogen-activated protein kinase-binding protein 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_032166-T1

CTAAGAAGCTTATTGCGTGCTACGAAGAACGTGAGTCGGGAAAGCTGAAACGCGCTTTTATAGTTCACGAAAATATTGAATCGGAGGGTGATTATCGAACGTTGTAGAATATTACCACTTATTAACTAATTATTATATTCTCACGAAGTTCTGTTTACTGCCACAAATCGATTACGATGCTATATCATTCAGCTGATGATCGACGTGATTGTTTTACTTGTTCGTTTCCAAAATGAACTCCGACAAAGTTGGAAGGATACCTCCTCCCACGAAAAGAGTTGTGGTGCGGAAAGCAAACAGCCATCGCGATTTACGTCCGTTGACTGAGAGGGCAACTCTTGAAAAAGTTTTGGGTTTGACTGTATCTAAAAATGCAGCGCTTGCATGTGATCCGTTGTCCGGGGTTGTTGCATATCCAGCTGGATGTGTGGTGGTTCTGTTTAACCCAAGAAAAAACAAACAGAGTTTTGTCCTCAGTACTTCAAAGAAAACTATTTCTTCTCTTGCATTTTCTGGAGATGGCAAATACTTGGCAACAGGCGAAAGTGGGCACATGCCATCTGTACGAATTTGGGATATGGAGGATCCTTCTCATCCTCAGATAGCAGAAATGACGAAAGGTCACAAGTTTGGTGTTGCATGCGTGGCATTCTCCCCTAACCTGAAGTATGTGGCTTCTGTTGGGTTCCAGCATGATATGATTGTAAATATCTGGAACTGGAAGGCTGGTACAAAGGTGGCCAGTAATAAAGTTTCTTCCAAAGTTTCAGCATTGTCATTTTCAGAGAATGGCAGTTACTTTGTTACAGTTGGTGTTCGTCATGTCAAGTTTTGGTATTTTGATACTGAGTCCAACAAATCCAAGTTATCAAAGACACTAGTTATCAGTGGTCGAGCAGCTCTCTTAGGAGAACAGAGAAACAACAAATTTTGTGACGTAGCATGTGGCCGTGGGCTTAACTCTGACATAACGTATTGTGTGACCAGTTCAGGGTTATTGTGTTCCATCAATAGCAAAAGAGTGTTGGATACTTGGGTTGAGCTTAAGACATCTAAAGCAAATGCCATAGTAGTGAGTGAAGAATTCATAGTGTGTGGATGTGCAGATGGAATAATAAGGGTGTTTAATCCTTTGAAGTTGCAGCACATTGTAACTCTGCCAAAACCTCATTTTCTTGGCGTCAACATAGCAGCAGGCATGGATTTGAGTAACCCTTTGTCAAAGGCAGAAAACGCCGCCTATCCTGACACAGTTGCTGTGGCACTTGATATGGTTAATCAGAGGTTGACTTGTGTTTACAATGACCATAGTTTGTACACTTGGAACGTGAAAGACATGAAGAAGATAGGAAAAACATGGTCTTCACTTTACCACAGCACATGTGTGTGGGGGGTTGAGGTTTATCCCAATTTATCAGACAGCCATGAGGCTGCTCTACCTCCAGGCTCATTCCTGACATGTTCATCTGATGATACTATCAGGGTGTGGAACATTGAAGAAGGAACAAATATTCTGTTTGATAGAAATGTCTACAGCAAGGAGATGATGAAAATCATATACACAGGAGAGACTGTAGAAAATTTGAAAGAAACAGATGTCAGTCCAGCTATAAAGAACATGCGGGATTCCACTAATGATTCACGCAATACTGGAGCAAGGTGCCTGCGGGTTAGCCCTGATGGGCAGACACTTGCTACTGGTGACAGATCTGGAAATGTCAGGGTTTATGATTTAACATTCTTTGATGAGACAGCAAAAATTGAAGCTCATGAATCTGAAGTATTGTGCGTGGAATTTTCACCCACAGAAAGTGGTCATAAACTACTTGCATCAGCTGGGCGTGATCGTCTCATTCACATATTTGATGTGCAGAACAACTTCAGCTTTGTGCAAACATTAGATGACCATTCAGCCTCAATTACATCAGTCAAATTTAATATGTCTGAATCTGATGAGTTGCAGCTTCTGAGTTGTGGAGCAGACAAGTCCATTATATTCAGGACAGCTCAACAGAATCCAGATCTGCAGTTTGTTAGAACAACAAATTATGTTGGTAAAACAACATTTTACGACATGGATATTGATATTTCCAGGTAAAGTGACATTTATTTTATTAACACCAGATTATTTCAAGCACTTTTAAACTCATTACCAATTGGTTAGCTGTGAAGCTGGTGCC

Protein

Uniprot

Gene family

Uniprot term	Description
Q6DFF9	Mitogen-activated protein kinase-binding protein 1 OS=Xenopus laevis OX=8355 GN=mapkbp1 PE=2 SV=1
Q6NS57	Mitogen-activated protein kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Mapkbp1 PE=1 SV=1
O60336	Mitogen-activated protein kinase-binding protein 1 OS=Homo sapiens OX=9606 GN=MAPKBP1 PE=1 SV=4

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44813	MITOGEN-ACTIVATED PROTEIN KINASE-BINDING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0043124	Biological Process	negative regulation of canonical NF-kappaB signal transduction	Interproscan
GO:0046330	Biological Process	positive regulation of JNK cascade	Interproscan