Detailed information of FUN_032234-T1 in Acropora pulchra

Genomic Location: ptg000023l:29984772...29992951
NR annotation: XP_015762741.1, PREDICTED: hemicentin-1-like isoform X1 [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y2C9Toll-like receptor 6 OS=Homo sapiens OX=9606 GN=TLR6 PE=1 SV=2
Q0ZUL9Toll-like receptor 6 OS=Dasypus novemcinctus OX=9361 GN=TLR6 PE=2 SV=1
Q9EPQ1Toll-like receptor 1 OS=Mus musculus OX=10090 GN=Tlr1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000113 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan
PF00047
all species →		igImmunoglobulin domainDomainInterproscan
PF01582
all species →		TIRTIR domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000157
all species →		DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013151
all species →		DomainImmunoglobulinInterproscan
IPR035897
all species →		Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR051170
all species →		FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12231
all species →		CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_032234-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP