Gene detail

Detailed information of FUN_032394-T1 in Acropora pulchra

Genomic Location: ptg000023l:31448118...31457677
NR annotation: XP_029206266.1, adenylyl cyclase-associated protein 1-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_032394-T1

TTCCGACGAGCTGTTCCATATAGGAGTCCCCCCCCCCCCCCCAGGGGCTTTTCAGAACAAAACTCACGGTTGAATAATCTCACTGAACAATACGTTTGAAGTTGTCCTTTAGCAGCATGTCGCACTGGTGTGGGGTGTAGATCAATTGAAGCCTTTAAGTGCTACTATGGTTCTTTATTGACTCCGAGCTTTCGCCGATCTACGGCATCATCAGGGAGAACGATAAAATATTTACGCTATGATTTTAAACGTAGAAGGTGTCACTATAAATTAGCATAATGTGAAGCTAGCCAGTAGGACGCATGAAAGCTAATGACTTGGTAAAATGAAAAACAATTGATTAAAATAACTGCTTAAAATAGAAGATCATTAAGTTCAGCACATTCCTCACGGGAGTTCCGCCCCGGCTTGTATTTTCTGATGTAATATGCTTCGTGTAGTCGCAGATTGACGGGGTCATTTTCACGCGTGATTACTTTGACTTCAATGTTATGGTTGTTGATGCGATGGTGTGTTGTGAGGTGTTTTTTTACCGACGAGTTGTCGTTGGCCAGGTGTTCTTTTGTTCGGTCATGTAGGAACCGTGTCGTGCTTCCGATGTAATATTCGCCACAGGCTTTTCACGTGAGCTGATAAACGGTGTTTCTCTGTAAGCATAAATTAGTGTCTGCGATAGGGCAGTTTGGTCTGTTGCATTTCCTTTCCGTTATGTTGTGTGAAAGGGCTTGTCTAAGAGTGTAGGACTTGTCGGCGATTCTTACTGGGATGTTTTCTCTCTTGAAGATTCCCGTGATTTTTCGGTTTGGTCGGTCTGAGATGAATGGGATTTTGAGGTAGTGCCACTCCTTTGTCTGTATTTGGGGGTCTCTTTGATGTTCCTGCAGGTGTTTAGTTTCATTTATGGTGCGTTCTGGATATCCGTTGAGGCGGAGAATGTTGTCGAAGTCGCGGTCGTGTTTGTTGGACGTTATTTGCGTTGTACATCTCTGTTGTATGCGCCTCAGGCCAAGATGCCTGAGGTGCTGGAGCCCATTGGTAGGCCTTCGGTCTGGCGGAAAATGCGGTCTTCAAAGATGAAGTGAACAATCTTAAGGCTGAGCAATTTATTGACTATTATTATTCTCAGAGGAGGGAATATTAAAGAACTCCTTAGTCAGTGTTCACCATTTCCCTTGGACTTCCCGATCAAGCATGCGCACTTTAACCTCATTTCCCCTCCGGAGATGTGTGGGGTCGAAGCCTGAGTGAGGCCTGGAAAAGAGCAAGCAACGCTACCATATTAGGAAAACAAGCAGTGTATTTCCCGGTCACTCCTCCTTGCATTTTCCTTCAAGTTTTGTCGCAAGGATATTTGCTTTATTTCAATTGTTCTCAGACCATTTTTCGGCATGTCTGGGGATCTGAGTGCTCTCGTAGCTCGTCTTGAAGCTGTGACTACTCGTCTGGAGGCTGCTGCTGATAAAACAGGCGGCGGAGCTTCGGAAGATGTTGGAGTATCGGTTGAAGGGTACGACAAGGTGTTAAATGACAAAGTAGCTGAGTTTTACAAGCTTTCAGCCAAAATAGGGGGTGAAGTGGACGAACAGGTTCAGCTAGTTAAGAAGGCATTTGATGCTCAGCGGCAGTTCATAGTCATTGCTTCTAAGAATCAGAAGCCAGGCTTGGAAGAATTTAAAAAGCTGGTGAAACCAACAGCTGATGCTATGGGTGAAGCTCAGAACTACCGAGAGAAGAAGCGCTCTAGCAAGATGTTTAACCACTTATCCGCTGTTAGTGAAGCCATTCCAGCTCTGGGATGGGTAACTGTGAGCCCCACTCCTGCACCTTATGTCAAAGAGATGGTAGATGCAGCCCAGTTCTACATGAACAGAGTCTTAAAAGACTACAAGGGAAAGGATGACACACATGTTGAGTGGGTGAAATGTCTTAAAGATGCCCTCACTGACCTCCAAGCCTATGTCAAGGCAAATCACACAACTGGGCTGGTTTGGAGCAAAACAGGTGGAGTGGCAAAGGCAGCAGCTGCAGCTGCAGCACCCCCACAGGGTCCAAAACCAGCCGCTCCTCCCCCTCCCCCAATACAAGCACCTGCACCAGTGAGCTCAGGAACAGACCAGAAAGGAGCTGCCAATGCCTTATTTAGTGAGATTAACAAGGCAGGAACAAATATTTCATCAGGATTAAGAAAAGTTCGAGATGATGAGAAGACCCACAAGAACAAAGAACTGAGGAAAACTGGACCAGTTCCAGACAGACCCAAACCTTCTCTAGCAGCTAAACCAAAAGCTGCAGCTGCTGTCAAGAAACCACCTGTGTTTCAACTGCAAGGCAAAAAGTGGGTTGTGGAATATCAAGAGAACAACAAGGATCTTGTAATTGCAGAGCCTCTTCAATCTCACACAGTGTACATTTATAGCTGCAAGAACAGCACTATTCAAGTTCAGGGAAAAATCAACTCCTTGGTTGTAGATAATTGCAAGAAAACAGCAGTGGTTTTAGATGGTGCCATTGGCACTGTTGAATTCATCAATTGTCAGAGTGCACAGTGTCAGATCAACGACAGTGTTCCAACAGTTTCCATCGACAAAACTGATGGCTGCCAAGTGTTCTTTCCCAAGGGCATTGGAGCAACTGAAATAGTGACGGCTAAATCATCTGAGATGAATATTATGATTCCCAAACCAGGATCCCAAGATATGATGGAGTTCGCACTCCCTGAGCAGTACAAAAGCTTTTGGAATGGCAAAACATTTGTAACTGTGTGCAGCGAATCACTTGGTTAAGTGCGGTGATTTGCTACAACCTCCTCCTCCCTTTCATGGAGAGTGTCAGGTTGTAGAATTAGATTACATATCAATTGATCCTTTAAAGCGCGACTCTCAGGAAAATAGAATTTTAAGGTCCATGAAACGAACGAAACATGTTGGCACAACATCATTCAACTTTGATCGGTGCAACATCCCTGCCAATGCTTCGGGTTTCTGTCGGAATATTGACCCCAAGGTCCCATCACTCACCCGCGGTCAATTTCCCATGACAGCCTAGCATTGTTAGCGGTATTGTGCCAACATGTTGCATTCATTTGCACGGGCCTTTTAGTAAACATTGAGCCCTTAACAGAAGTTTAACCGCCAATCGAAGAAATCATTTCAGTTTTGATTTTGGTATTTTTTCAACTAAATCAGAAACAGAAGTGATTTTCCCTAAAGTGTTTGTATTTGCCGAAAGTAACAAACCAAAAATTGTATTTTTTCTATTGCACGTGACAAGACCTTGCTATGAACAACACGCATT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P40123	Adenylyl cyclase-associated protein 2 OS=Homo sapiens OX=9606 GN=CAP2 PE=1 SV=1
Q5R5X8	Adenylyl cyclase-associated protein 2 OS=Pongo abelii OX=9601 GN=CAP2 PE=2 SV=1
Q9CYT6	Adenylyl cyclase-associated protein 2 OS=Mus musculus OX=10090 GN=Cap2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002487 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08603 all species →	CAP_C	Adenylate cyclase associated (CAP) C terminal	Family	Interproscan
PF01213 all species →	CAP_N	Adenylate cyclase associated (CAP) N terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013912 all species →	Domain	Adenylate cyclase-associated CAP, C-terminal	Interproscan
IPR013992 all species →	Domain	Adenylate cyclase-associated CAP, N-terminal	Interproscan
IPR006599 all species →	Domain	CARP motif	Interproscan
IPR001837 all species →	Family	Adenylate cyclase-associated CAP	Interproscan
IPR036222 all species →	Homologous_superfamily	Adenylate cyclase-associated CAP, N-terminal domain superfamily	Interproscan
IPR016098 all species →	Homologous_superfamily	Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal	Interproscan
IPR036223 all species →	Homologous_superfamily	Adenylate cyclase-associated CAP, C-terminal superfamily	Interproscan
IPR018106 all species →	Conserved_site	CAP, conserved site, N-terminal	Interproscan
IPR028417 all species →	Conserved_site	CAP, conserved site, C-terminal	Interproscan
IPR017901 all species →	Domain	C-CAP/cofactor C-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10652 all species →	ADENYLYL CYCLASE-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0007010 all species →	Biological Process	cytoskeleton organization	Interproscan
GO:0000902 all species →	Biological Process	cell morphogenesis	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007015 all species →	Biological Process	actin filament organization	Interproscan
GO:0008179 all species →	Molecular Function	adenylate cyclase binding	Interproscan
GO:0019933 all species →	Biological Process	cAMP-mediated signaling	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17261	CAP1_2, SRV2; adenylyl cyclase-associated protein	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.