Detailed information of FUN_032476-T1 in Dendrogyra cylindrus

Genomic Location: contig_96:21849...76723
NR annotation: XP_020613440.1, synaptojanin-1-like [Orbicella faveolata]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O43426Synaptojanin-1 OS=Homo sapiens OX=9606 GN=SYNJ1 PE=1 SV=2
O18964Synaptojanin-1 (Fragment) OS=Bos taurus OX=9913 GN=SYNJ1 PE=1 SV=2
Q62910Synaptojanin-1 OS=Rattus norvegicus OX=10116 GN=Synj1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004270 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02383
all species →		Syja_NSacI homology domainFamilyInterproscan
PF08952
all species →		DUF1866Domain of unknown function (DUF1866) DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002013
all species →		DomainSAC domainInterproscan
IPR036691
all species →		Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR000095
all species →		DomainCRIB domainInterproscan
IPR000300
all species →		DomainInositol polyphosphate-related phosphataseInterproscan
IPR015047
all species →		DomainSynaptojanin-1/2, RNA recognition motifInterproscan
IPR035979
all species →		Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677
all species →		Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR046985
all species →		FamilyInositol 5-phosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11200
all species →		INOSITOL 5-PHOSPHATASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016791
all species →		Molecular Functionphosphatase activityInterproscan
GO:0046856
all species →		Biological Processphosphatidylinositol dephosphorylationInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0004439
all species →		Molecular Functionphosphatidylinositol-4,5-bisphosphate 5-phosphatase activityInterproscan
GO:0048488
all species →		Biological Processsynaptic vesicle endocytosisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_032476-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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