Genomic Location: contig_96:1308084...1357987
NR annotation: XP_020605209.1, uncharacterized protein LOC110044027 isoform X4 [Orbicella faveolata]
| CDS | ||||
| FUN_032589-T2 | ||||
| Transcript |
| FUN_032589-T2 |
| Protein |
| FUN_032589-T2 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| B3EWZ5 | MAM and LDL-receptor class A domain-containing protein 1 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1 | |||
| F7J220 | Scavenger receptor cysteine-rich domain superfamily protein OS=Patiria pectinifera OX=7594 GN=SRCR1 PE=1 SV=1 | |||
| Q95218 | Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Oryctolagus cuniculus OX=9986 GN=Dmbt1 PE=1 SV=2 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|U-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00057 | Ldl_recept_a | Low-density lipoprotein receptor domain class A | Repeat | Interproscan |
| PF00530 | SRCR | Scavenger receptor cysteine-rich domain | Domain | Interproscan |
| PF00431 | CUB | CUB domain | Domain | Interproscan |
| PF01822 | WSC | WSC domain | Domain | Interproscan |
| PF00629 | MAM | MAM domain, meprin/A5/mu | Domain | Interproscan |
| PF04564 | U-box | U-box domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000859 | Domain | CUB domain | Interproscan |
| IPR002172 | Repeat | Low-density lipoprotein (LDL) receptor class A repeat | Interproscan |
| IPR001190 | Domain | SRCR domain | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR036772 | Homologous_superfamily | SRCR-like domain superfamily | Interproscan |
| IPR023415 | Conserved_site | Low-density lipoprotein (LDL) receptor class A, conserved site | Interproscan |
| IPR000998 | Domain | MAM domain | Interproscan |
| IPR035914 | Homologous_superfamily | Spermadhesin, CUB domain superfamily | Interproscan |
| IPR017448 | Domain | SRCR-like domain | Interproscan |
| IPR036055 | Homologous_superfamily | LDL receptor-like superfamily | Interproscan |
| IPR050686 | Family | SRCR-S1 Scavenger Receptor | Interproscan |
| IPR003613 | Domain | U-box domain | Interproscan |
| IPR002889 | Domain | Carbohydrate-binding WSC | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48071 | SRCR DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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