Detailed information of FUN_032785-T1 in Acropora pulchra

Genomic Location: ptg000023l:35927428...35931729
NR annotation: XP_044180956.1, E3 ubiquitin-protein ligase MIB2-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q68LP1E3 ubiquitin-protein ligase MIB2 OS=Rattus norvegicus OX=10116 GN=Mib2 PE=1 SV=2
Q8R516E3 ubiquitin-protein ligase MIB2 OS=Mus musculus OX=10090 GN=Mib2 PE=1 SV=2
Q96AX9E3 ubiquitin-protein ligase MIB2 OS=Homo sapiens OX=9606 GN=MIB2 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000489 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00569
all species →		ZZZinc finger, ZZ typeDomainInterproscan
PF06701
all species →		MIB_HERC2Mib_herc2DomainInterproscan
PF18346
all species →		SH3_15Mind bomb SH3 repeat domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000433
all species →		DomainZinc finger, ZZ-typeInterproscan
IPR010606
all species →		DomainMib-herc2Interproscan
IPR040847
all species →		DomainMind bomb, SH3 repeat domainInterproscan
IPR043145
all species →		Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR037252
all species →		Homologous_superfamilyMib/herc2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24202
all species →		E3 UBIQUITIN-PROTEIN LIGASE MIB2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_032785-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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